ENSDARG00000111069


Danio rerio

Features
Gene ID: ENSDARG00000111069
  
Biological name :lgi2a
  
Synonyms : leucine-rich repeat LGI family, member 2a / lgi2a
  
Possible biological names infered from orthology : leucine rich repeat LGI family member 2 / LGI2 / Q8K4Z0 / Q8N0V4
  
Species: Danio rerio
  
Chr. number: 7
Strand: -1
Band:
Gene start: 71423612
Gene end: 71434298
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000153249
swissprot - F1QP43
ZFIN ID - ZDB-GENE-060217-2
Ensembl - ENSDARG00000111069
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LGI2ENSGALG00000043283Gallus gallus
 LGI2ENSG00000153012Homo sapiens
 Lgi2ENSMUSG00000039252Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lgi2b / leucine-rich repeat LGI family, member 2b / LGI2* / Q8K4Z0* / Q8N0V4* / leucine rich repeat LGI family member 2*ENSDARG0000006970162
lgi3 / leucine-rich repeat LGI family, member 3 / Q8K406* / Q8N145*ENSDARG0000004135850
lgi1a / leucine-rich, glioma inactivated 1a / LGI4* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000002049350
lgi1b / leucine-rich, glioma inactivated 1b / LGI4* / Q8K1S1* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000005842150
lrig1 / leucine-rich repeats and immunoglobulin-like domains 1 / P70193* / Q96JA1* / Leucine-rich repeats and immunoglobulin-like domains protein 1 *ENSDARG0000007562519
lrig2 / leucine-rich repeats and immunoglobulin-like domains 2 / O94898* / Q52KR2*ENSDARG0000007856117
vasnb / vasorin b / VASN* / Q9CZT5* / Q6EMK4* / vasorin*ENSDARG0000010256514
adgra2 / E7FBY6 / adhesion G protein-coupled receptor A2 / Q91ZV8* / Q96PE1*ENSDARG0000007699414
vasna / vasorin a / VASN* / Q6EMK4* / vasorin*ENSDARG0000009926613
adgra3 / adhesion G protein-coupled receptor A3 / Q8IWK6*ENSDARG000000736738
adgra1a / adhesion G protein-coupled receptor A1aENSDARG000000541776


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR005492  Leucine-rich glioma-inactivated , EPTP repeat
 IPR009039  EAR
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
LGI-ADAM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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