ENSDARG00000102565


Danio rerio

Features
Gene ID: ENSDARG00000102565
  
Biological name :vasnb
  
Synonyms : vasnb / vasorin b
  
Possible biological names infered from orthology : Q6EMK4 / Q9CZT5 / VASN / vasorin
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 12440099
Gene end: 12487576
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000150614
Ensembl peptide - ENSDARP00000132305
NCBI entrez gene - 100004428     See in Manteia.
RefSeq - NM_001110762
RefSeq Peptide - NP_001104232
swissprot - A4QNV9
ZFIN ID - ZDB-GENE-110714-1
Ensembl - ENSDARG00000102565
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VASNENSG00000168140Homo sapiens
 VasnENSMUSG00000039646Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vasna / vasorin a / VASN* / Q6EMK4* / vasorin*ENSDARG0000009926650
lrig2 / leucine-rich repeats and immunoglobulin-like domains 2 / O94898* / Q52KR2*ENSDARG0000007856120
lrig1 / leucine-rich repeats and immunoglobulin-like domains 1 / P70193* / Q96JA1* / Leucine-rich repeats and immunoglobulin-like domains protein 1 *ENSDARG0000007562520
adgra2 / E7FBY6 / adhesion G protein-coupled receptor A2 / Q91ZV8* / Q96PE1*ENSDARG0000007699413
lgi2a / leucine-rich repeat LGI family, member 2a / LGI2* / Q8N0V4* / leucine rich repeat LGI family member 2*ENSDARG0000011106911
lgi2b / leucine-rich repeat LGI family, member 2b / LGI2* / Q8K4Z0* / Q8N0V4* / leucine rich repeat LGI family member 2*ENSDARG0000006970111
lgi3 / leucine-rich repeat LGI family, member 3 / Q8K406* / Q8N145*ENSDARG0000004135810
lgi1b / leucine-rich, glioma inactivated 1b / LGI4* / Q8K1S1* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000005842110
lgi1a / leucine-rich, glioma inactivated 1a / LGI4* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000002049310
adgra3 / adhesion G protein-coupled receptor A3 / Q8IWK6*ENSDARG000000736735
adgra1a / adhesion G protein-coupled receptor A1aENSDARG000000541773


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR000742  EGF-like domain
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR003961  Fibronectin type III
 IPR013032  EGF-like, conserved site
 IPR013783  Immunoglobulin-like fold
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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