ENSDARG00000041358


Danio rerio

Features
Gene ID: ENSDARG00000041358
  
Biological name :lgi3
  
Synonyms : leucine-rich repeat LGI family, member 3 / lgi3
  
Possible biological names infered from orthology : Q8K406 / Q8N145
  
Species: Danio rerio
  
Chr. number: 8
Strand: -1
Band:
Gene start: 51375308
Gene end: 51404806
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000060624
NCBI entrez gene - 654830     See in Manteia.
RefSeq - NM_001039679
RefSeq Peptide - NP_001034768
swissprot - Q2HPG0
ZFIN ID - ZDB-GENE-060217-4
Ensembl - ENSDARG00000041358
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 LGI3ENSG00000168481Homo sapiens
 Lgi3ENSMUSG00000033595Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
lgi1b / leucine-rich, glioma inactivated 1b / LGI4* / Q8K1S1* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000005842154
lgi1a / leucine-rich, glioma inactivated 1a / LGI4* / Q8N135* / leucine rich repeat LGI family member 4*ENSDARG0000002049352
lgi2a / leucine-rich repeat LGI family, member 2a / LGI2* / Q8N0V4* / leucine rich repeat LGI family member 2*ENSDARG0000011106948
lgi2b / leucine-rich repeat LGI family, member 2b / LGI2* / Q8K4Z0* / Q8N0V4* / leucine rich repeat LGI family member 2*ENSDARG0000006970143
lrig1 / leucine-rich repeats and immunoglobulin-like domains 1 / P70193* / Q96JA1* / Leucine-rich repeats and immunoglobulin-like domains protein 1 *ENSDARG0000007562518
lrig2 / leucine-rich repeats and immunoglobulin-like domains 2 / O94898* / Q52KR2*ENSDARG0000007856117
adgra2 / E7FBY6 / adhesion G protein-coupled receptor A2 / Q91ZV8* / Q96PE1*ENSDARG0000007699415
vasnb / vasorin b / VASN* / Q9CZT5* / Q6EMK4* / vasorin*ENSDARG0000010256513
vasna / vasorin a / VASN* / Q6EMK4* / vasorin*ENSDARG0000009926612
adgra3 / adhesion G protein-coupled receptor A3 / Q8IWK6*ENSDARG000000736737
adgra1a / adhesion G protein-coupled receptor A1aENSDARG000000541775


Protein motifs (from Interpro)
Interpro ID Name
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR005492  Leucine-rich glioma-inactivated , EPTP repeat
 IPR009039  EAR
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
LGI-ADAM interactions


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000060532 adam22 / ADAM metallopeptidase domain 22 / Q9P0K1* / Q9R1V6* / Disintegrin and metalloproteinase domain-containing protein 22 *  / reaction / complex






 

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