ENSG00000009844


Homo sapiens

Features
Gene ID: ENSG00000009844
  
Biological name :VTA1
  
Synonyms : Q9NP79 / vesicle trafficking 1 / VTA1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: q24.1
Gene start: 142147162
Gene end: 142224689
  
Corresponding Affymetrix probe sets: 223021_x_at (Human Genome U133 Plus 2.0 Array)   223022_s_at (Human Genome U133 Plus 2.0 Array)   224437_s_at (Human Genome U133 Plus 2.0 Array)   237059_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000481525
Ensembl peptide - ENSP00000356593
Ensembl peptide - ENSP00000356602
Ensembl peptide - ENSP00000395767
NCBI entrez gene - 51534     See in Manteia.
OMIM - 610902
RefSeq - NM_001286371
RefSeq - NM_001286372
RefSeq - NM_016485
RefSeq Peptide - NP_001273300
RefSeq Peptide - NP_001273301
RefSeq Peptide - NP_057569
swissprot - Q9NP79
swissprot - A0A087WY55
swissprot - Q5TGM0
Ensembl - ENSG00000009844
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vta1ENSDARG00000013732Danio rerio
 VTA1ENSGALG00000013810Gallus gallus
 Vta1ENSMUSG00000019868Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR023175  Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016197 endosomal transport TAS
 biological_processGO:0016236 macroautophagy NAS
 biological_processGO:0019058 viral life cycle TAS
 biological_processGO:0036258 multivesicular body assembly NAS
 biological_processGO:0046755 viral budding IMP
 biological_processGO:0071985 multivesicular body sorting pathway IMP
 biological_processGO:1904903 ESCRT III complex disassembly NAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IPI


Pathways (from Reactome)
Pathway description
Budding and maturation of HIV virion
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000086065 CHMP5 / Q9NZZ3 / charged multivesicular body protein 5  / complex
 ENSG00000119541 VPS4B / O75351 / vacuolar protein sorting 4 homolog B  / complex
 ENSG00000132612 VPS4A / Q9UN37 / vacuolar protein sorting 4 homolog A  / complex






 

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