ENSMUSG00000019868


Mus musculus

Features
Gene ID: ENSMUSG00000019868
  
Biological name :Vta1
  
Synonyms : Q9CR26 / vesicle (multivesicular body) trafficking 1 / Vta1
  
Possible biological names infered from orthology : Q9NP79 / vesicle trafficking 1
  
Species: Mus musculus
  
Chr. number: 10
Strand: -1
Band: A2
Gene start: 14654755
Gene end: 14705560
  
Corresponding Affymetrix probe sets: 10368011 (MoGene1.0st)   10338410 (MoGene1.0st)   10338610 (MoGene1.0st)   10340956 (MoGene1.0st)   10342375 (MoGene1.0st)   10342484 (MoGene1.0st)   10342967 (MoGene1.0st)   10343245 (MoGene1.0st)   10343816 (MoGene1.0st)   10343077 (MoGene1.0st)   10343532 (MoGene1.0st)   10344566 (MoGene1.0st)   1415722_a_at (Mouse Genome 430 2.0 Array)   1441646_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000020018
Ensembl peptide - ENSMUSP00000118498
Ensembl peptide - ENSMUSP00000119829
Ensembl peptide - ENSMUSP00000119958
NCBI entrez gene - 66201     See in Manteia.
MGI - MGI:1913451
RefSeq - XM_006512809
RefSeq - NM_025418
RefSeq Peptide - NP_079694
swissprot - F6W5Q8
swissprot - F6RYM7
swissprot - Q9CR26
swissprot - F8WJC2
Ensembl - ENSMUSG00000019868
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vta1ENSDARG00000013732Danio rerio
 VTA1ENSGALG00000013810Gallus gallus
 VTA1ENSG00000009844Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR023175  Vacuolar protein sorting-associate protein Vta1/Callose synthase, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0046755 viral budding IEA
 biological_processGO:0071985 multivesicular body sorting pathway IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010008 endosome membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IEA


Pathways (from Reactome)
Pathway description
Endosomal Sorting Complex Required For Transport (ESCRT)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000031913 Vps4a / Q8VEJ9 / vacuolar protein sorting 4A / Q9UN37* / AC026464.4* / vacuolar protein sorting 4 homolog A*  / complex
 ENSMUSG00000028419 Chmp5 / Q9D7S9 / Charged multivesicular body protein 5 / Q9NZZ3*  / complex
 ENSMUSG00000009907 Vps4b / P46467 / vacuolar protein sorting 4B / O75351* / vacuolar protein sorting 4 homolog B*  / complex






 

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