ENSG00000012660


Homo sapiens

Features
Gene ID: ENSG00000012660
  
Biological name :ELOVL5
  
Synonyms : ELOVL5 / ELOVL fatty acid elongase 5 / Q9NYP7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p12.1
Gene start: 53267398
Gene end: 53349179
  
Corresponding Affymetrix probe sets: 1567222_x_at (Human Genome U133 Plus 2.0 Array)   208788_at (Human Genome U133 Plus 2.0 Array)   214153_at (Human Genome U133 Plus 2.0 Array)   215082_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359956
Ensembl peptide - ENSP00000440728
Ensembl peptide - ENSP00000306640
Ensembl peptide - ENSP00000359951
NCBI entrez gene - 60481     See in Manteia.
OMIM - 611805
RefSeq - NM_001242830
RefSeq - NM_001242828
RefSeq - NM_001242831
RefSeq - NM_001301856
RefSeq - NM_021814
RefSeq Peptide - NP_068586
RefSeq Peptide - NP_001229759
RefSeq Peptide - NP_001229760
RefSeq Peptide - NP_001288785
RefSeq Peptide - NP_001229757
swissprot - Q9NYP7
swissprot - A0A0A0MTI6
swissprot - A0A024RD35
Ensembl - ENSG00000012660
  
Related genetic diseases (OMIM): 615957 - Spinocerebellar ataxia 38, 615957
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elovl5ENSDARG00000004979Danio rerio
 ELOVL5ENSGALG00000016314Gallus gallus
 Elovl5ENSMUSG00000032349Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ELOVL2 / Q9NXB9 / ELOVL fatty acid elongase 2ENSG0000019797751
ELOVL4 / Q9GZR5 / ELOVL fatty acid elongase 4ENSG0000011840237
A1L3X0 / ELOVL7 / ELOVL fatty acid elongase 7ENSG0000016418131
ELOVL1 / Q9BW60 / ELOVL fatty acid elongase 1ENSG0000006632230
ELOVL6 / Q9H5J4 / ELOVL fatty acid elongase 6ENSG0000017052218
ELOVL3 / Q9HB03 / ELOVL fatty acid elongase 3ENSG0000011991517


Protein motifs (from Interpro)
Interpro ID Name
 IPR002076  ELO family
 IPR033677  Elongation of very long chain fatty acids protein 5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006633 fatty acid biosynthetic process IEA
 biological_processGO:0006636 unsaturated fatty acid biosynthetic process IEA
 biological_processGO:0019367 fatty acid elongation, saturated fatty acid IEA
 biological_processGO:0030148 sphingolipid biosynthetic process IBA
 biological_processGO:0034625 fatty acid elongation, monounsaturated fatty acid IDA
 biological_processGO:0034626 fatty acid elongation, polyunsaturated fatty acid IEA
 biological_processGO:0035338 long-chain fatty-acyl-CoA biosynthetic process TAS
 biological_processGO:0036109 alpha-linolenic acid metabolic process TAS
 biological_processGO:0042761 very long-chain fatty acid biosynthetic process IEA
 biological_processGO:0043651 linoleic acid metabolic process TAS
 biological_processGO:0045723 positive regulation of fatty acid biosynthetic process IMP
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane IBA
 cellular_componentGO:0030425 dendrite IEA
 cellular_componentGO:0042995 cell projection IEA
 cellular_componentGO:0043025 neuronal cell body IDA
 cellular_componentGO:0097447 dendritic tree IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0009922 fatty acid elongase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0102336 3-oxo-arachidoyl-CoA synthase activity IEA
 molecular_functionGO:0102337 3-oxo-cerotoyl-CoA synthase activity IEA
 molecular_functionGO:0102338 3-oxo-lignoceronyl-CoA synthase activity IEA
 molecular_functionGO:0102756 very-long-chain 3-ketoacyl-CoA synthase activity IEA


Pathways (from Reactome)
Pathway description
Linoleic acid (LA) metabolism
alpha-linolenic acid (ALA) metabolism
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000514 Slow saccades 
Show

 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
Show

 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
Show

 HP:0001272 Cerebellar atrophy 
Show

 HP:0002066 Gait ataxia "Impairment of the ability to coordinate the movements required for normal walking." [HPO:curators]
Show

 HP:0002070 Limb ataxia 
Show

 HP:0003477 Axonal neuropathy 
Show

 HP:0003677 Slow progression 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr