ENSG00000054277


Homo sapiens

Features
Gene ID: ENSG00000054277
  
Biological name :OPN3
  
Synonyms : OPN3 / opsin 3 / Q9H1Y3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q43
Gene start: 241590102
Gene end: 241677376
  
Corresponding Affymetrix probe sets: 219032_x_at (Human Genome U133 Plus 2.0 Array)   224392_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000490012
Ensembl peptide - ENSP00000490178
Ensembl peptide - ENSP00000490089
Ensembl peptide - ENSP00000355512
NCBI entrez gene - 23596     See in Manteia.
OMIM - 606695
RefSeq - NM_014322
RefSeq Peptide - NP_055137
swissprot - A0A1B0GUF8
swissprot - Q6GMT1
swissprot - Q6P5W7
swissprot - Q9H1Y3
Ensembl - ENSG00000054277
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opn3ENSDARG00000052775Danio rerio
 OPN3ENSGALG00000010762Gallus gallus
 Opn3ENSMUSG00000026525Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RHO / P08100 / rhodopsinENSG0000016391424
OPN4 / Q9UHM6 / opsin 4ENSG0000012237524
OPN1MW / P04001 / opsin 1, medium wave sensitiveENSG0000026822124
P0DN77 / OPN1MW2 / opsin 1, medium wave sensitive 2ENSG0000016616024
P0DN78 / OPN1MW3 / opsin 1, medium wave sensitive 3ENSG0000026943324
OPN1LW / P04000 / opsin 1, long wave sensitiveENSG0000010207624
RRH / O14718 / retinal pigment epithelium-derived rhodopsin homologENSG0000018024523
OPN5 / Q6U736 / opsin 5ENSG0000012481822
OPN1SW / P03999 / opsin 1, short wave sensitiveENSG0000012861722


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007602 phototransduction NAS
 biological_processGO:0009583 detection of light stimulus NAS
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0042752 regulation of circadian rhythm NAS
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0005887 integral component of plasma membrane TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity NAS
 molecular_functionGO:0009881 photoreceptor activity NAS


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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