ENSG00000124818


Homo sapiens

Features
Gene ID: ENSG00000124818
  
Biological name :OPN5
  
Synonyms : OPN5 / opsin 5 / Q6U736
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: 1
Band: p12.3
Gene start: 47781982
Gene end: 47832780
  
Corresponding Affymetrix probe sets: 1568914_at (Human Genome U133 Plus 2.0 Array)   233657_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000491960
Ensembl peptide - ENSP00000360255
Ensembl peptide - ENSP00000377302
Ensembl peptide - ENSP00000426991
NCBI entrez gene - 221391     See in Manteia.
OMIM - 609042
RefSeq - XM_017010416
RefSeq - NM_181744
RefSeq - XM_017010410
RefSeq - XM_017010411
RefSeq Peptide - NP_859528
swissprot - Q6U736
swissprot - J3KPQ2
swissprot - D6RDV4
Ensembl - ENSG00000124818
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opn5ENSDARG00000070110Danio rerio
 OPN5ENSGALG00000016725Gallus gallus
 Opn5ENSMUSG00000043972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
OPN3 / Q9H1Y3 / opsin 3ENSG0000005427725
OPN4 / Q9UHM6 / opsin 4ENSG0000012237525
RRH / O14718 / retinal pigment epithelium-derived rhodopsin homologENSG0000018024525
RHO / P08100 / rhodopsinENSG0000016391422
P0DN78 / OPN1MW3 / opsin 1, medium wave sensitive 3ENSG0000026943321
P0DN77 / OPN1MW2 / opsin 1, medium wave sensitive 2ENSG0000016616021
OPN1MW / P04001 / opsin 1, medium wave sensitiveENSG0000026822121
OPN1LW / P04000 / opsin 1, long wave sensitiveENSG0000010207621
OPN1SW / P03999 / opsin 1, short wave sensitiveENSG0000012861719


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002962  Peropsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IEA
 molecular_functionGO:0005502 11-cis retinal binding IEA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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