ENSMUSG00000043972


Mus musculus

Features
Gene ID: ENSMUSG00000043972
  
Biological name :Opn5
  
Synonyms : Opn5 / Opsin-5 / Q6VZZ7
  
Possible biological names infered from orthology : Q6U736
  
Species: Mus musculus
  
Chr. number: 17
Strand: -1
Band: B3
Gene start: 42556783
Gene end: 42611313
  
Corresponding Affymetrix probe sets: 10450968 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000063542
NCBI entrez gene - 353344     See in Manteia.
MGI - MGI:2662912
RefSeq - NM_181753
RefSeq - XM_006524453
RefSeq Peptide - NP_861418
swissprot - Q6VZZ7
Ensembl - ENSMUSG00000043972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 opn5ENSDARG00000070110Danio rerio
 OPN5ENSGALG00000016725Gallus gallus
 OPN5ENSG00000124818Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Opn4 / Q9QXZ9 / Melanopsin / Q9UHM6* / opsin 4*ENSMUSG0000002179923
Opn3 / Q9WUK7 / Opsin-3 / Q9H1Y3*ENSMUSG0000002652523
Rrh / O35214 / retinal pigment epithelium derived rhodopsin homolog / O14718*ENSMUSG0000002801223
Rho / P15409 / Rhodopsin / P08100*ENSMUSG0000003032420
Opn1mw / O35599 / Medium-wave-sensitive opsin 1 / P0DN78* / OPN1LW* / P04000* / P04001* / P0DN77* / OPN1MW2* / OPN1MW3* / opsin 1, long wave sensitive* / opsin 1, medium wave sensitive* / ...ENSMUSG0000003139419
Opn1sw / P51491 / Short-wave-sensitive opsin 1 / P03999* / opsin 1, short wave sensitive*ENSMUSG0000005883116


Protein motifs (from Interpro)
Interpro ID Name
 IPR000276  G protein-coupled receptor, rhodopsin-like
 IPR002962  Peropsin
 IPR017452  GPCR, rhodopsin-like, 7TM
 IPR027430  Visual pigments (opsins) retinal binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0007186 G-protein coupled receptor signaling pathway IEA
 biological_processGO:0007601 visual perception IEA
 biological_processGO:0007602 phototransduction IEA
 biological_processGO:0009584 detection of visible light IEA
 biological_processGO:0018298 protein-chromophore linkage IEA
 biological_processGO:0050896 response to stimulus IEA
 cellular_componentGO:0001750 photoreceptor outer segment IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004871 obsolete signal transducer activity IEA
 molecular_functionGO:0004930 G-protein coupled receptor activity IDA
 molecular_functionGO:0005502 11-cis retinal binding IDA
 molecular_functionGO:0008020 G-protein coupled photoreceptor activity IBA
 molecular_functionGO:0009881 photoreceptor activity IEA


Pathways (from Reactome)
Pathway description
G alpha (i) signalling events
Opsins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005253 abnormal eye physiology "anomalous function and/or activity of the ocular system or any of its parts" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Rgs9tm1(cre)Yql/Rgs9+,Tg(CAG-Ppard*E411P)#Als/0
Genetic Background: B6J.Cg-Rgs9tm1(cre)Yql Tg(CAG-Ppard*E411P)#Als

Allelic Composition: Opn5tm1.1Lan/Opn5tm1.1Yau,Per2tm1Jt/Per2+
Genetic Background: involves: 129S4/SvJaeSor * 129S6/SvEvTac * C57BL/6N * FVB/N

Allelic Composition: Opn5tm1.1Yau/Opn5tm1.1Yau,Per2tm1Jt/Per2+
Genetic Background: involves: 129S6/SvEvTac

 MP:0020476 abnormal circardian behavior entrainment "anomaly in the synchronization of a circadian behavior to environmental time cues such as light" [GO:0009649]
Show

Allelic Composition: Opn5tm1.1Lan/Opn5tm1.1Yau,Per2tm1Jt/Per2+
Genetic Background: involves: 129S4/SvJaeSor * 129S6/SvEvTac * C57BL/6N * FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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