ENSG00000068366


Homo sapiens

Features
Gene ID: ENSG00000068366
  
Biological name :ACSL4
  
Synonyms : ACSL4 / acyl-CoA synthetase long chain family member 4 / O60488
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: X
Strand: -1
Band: q23
Gene start: 109624244
Gene end: 109733403
  
Corresponding Affymetrix probe sets: 1557418_at (Human Genome U133 Plus 2.0 Array)   1557419_a_at (Human Genome U133 Plus 2.0 Array)   202422_s_at (Human Genome U133 Plus 2.0 Array)   220010_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000419171
Ensembl peptide - ENSP00000425408
Ensembl peptide - ENSP00000425378
Ensembl peptide - ENSP00000424808
Ensembl peptide - ENSP00000423539
Ensembl peptide - ENSP00000423077
Ensembl peptide - ENSP00000421425
Ensembl peptide - ENSP00000262835
Ensembl peptide - ENSP00000339787
NCBI entrez gene - 2182     See in Manteia.
OMIM - 300157
RefSeq - XM_011530889
RefSeq - NM_001318509
RefSeq - NM_001318510
RefSeq - NM_004458
RefSeq - NM_022977
RefSeq - XM_005262109
RefSeq - XM_006724635
RefSeq - XM_011530888
RefSeq Peptide - NP_001305439
RefSeq Peptide - NP_001305438
RefSeq Peptide - NP_004449
RefSeq Peptide - NP_075266
swissprot - A0A0C4DGB7
swissprot - D6RF95
swissprot - H0Y9A0
swissprot - D6RD96
swissprot - D6RFW9
swissprot - D6RDA8
swissprot - O60488
Ensembl - ENSG00000068366
  
Related genetic diseases (OMIM): 300387 - Mental retardation, X-linked 63, 300387
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 acsl4aENSDARG00000004078Danio rerio
 ACSL4ENSGALG00000008088Gallus gallus
 Acsl4ENSMUSG00000031278Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACSL3 / O95573 / acyl-CoA synthetase long chain family member 3ENSG0000012398366
ACSL6 / Q9UKU0 / acyl-CoA synthetase long chain family member 6ENSG0000016439830
ACSL1 / P33121 / acyl-CoA synthetase long chain family member 1ENSG0000015172630
ACSL5 / Q9ULC5 / acyl-CoA synthetase long chain family member 5ENSG0000019714230
AC026398.1ENSG0000028193828
ACSBG2 / Q5FVE4 / acyl-CoA synthetase bubblegum family member 2ENSG0000013037720
ACSBG1 / Q96GR2 / acyl-CoA synthetase bubblegum family member 1ENSG0000010374020


Protein motifs (from Interpro)
Interpro ID Name
 IPR000873  AMP-dependent synthetase/ligase
 IPR020845  AMP-binding, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001676 long-chain fatty acid metabolic process IEA
 biological_processGO:0006629 lipid metabolic process IEA
 biological_processGO:0006631 fatty acid metabolic process IEA
 biological_processGO:0006641 triglyceride metabolic process IEA
 biological_processGO:0007584 response to nutrient IEA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0015908 fatty acid transport IEA
 biological_processGO:0030182 neuron differentiation IEA
 biological_processGO:0035338 long-chain fatty-acyl-CoA biosynthetic process TAS
 biological_processGO:0060136 embryonic process involved in female pregnancy IEA
 biological_processGO:0060996 dendritic spine development IEA
 biological_processGO:0070672 response to interleukin-15 IEA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005741 mitochondrial outer membrane IEA
 cellular_componentGO:0005777 peroxisome IEA
 cellular_componentGO:0005778 peroxisomal membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane TAS
 cellular_componentGO:0005811 lipid droplet IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031090 organelle membrane IEA
 cellular_componentGO:0031966 mitochondrial membrane IEA
 cellular_componentGO:0043025 neuronal cell body IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 cellular_componentGO:0044233 ER-mitochondrion membrane contact site IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004467 long-chain fatty acid-CoA ligase activity IDA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0031957 very long-chain fatty acid-CoA ligase activity IMP
 molecular_functionGO:0047676 arachidonate-CoA ligase activity IDA
 molecular_functionGO:0102391 decanoate-CoA ligase activity IEA


Pathways (from Reactome)
Pathway description
Synthesis of very long-chain fatty acyl-CoAs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000083 Renal failure 
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 HP:0000093 Proteinuria 
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 HP:0000233 Thin vermillion border 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000545 Myopia 
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 HP:0000739 Anxiety 
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 HP:0000944 Abnormality of the metaphyses 
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 HP:0001182 Tapered fingers 
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001423 X-linked dominant inheritance "A mode of inheritance that is observed for dominant traits related to a gene encoded on the X chromosome. In the context of medical genetics, X-linked dominant disorders tend to manifest very severely in affected males. The severity of manifestation in females may depend on the degree of skewed X inactivation." [HPO:curators]
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 HP:0001595 Hair abnormality 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001646 Abnormality of the aortic valve "Any abnormality of the `aortic valve` (FMA:7236)." [HPO:curators]
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 HP:0002463 Language impairment 
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 HP:0002907 Microscopic hematuria 
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 HP:0004445 Elliptocytosis 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011069 Increased number of teeth "The presence of a `supernumerary` (PATO:0000470), i.e., extra, `tooth` (FMA:12516) or teeth." [HPO:ibailleulforestier]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0100820 Glomerulopathy "Inflammatory or noninflammatory diseases affecting the glomeruli of the nephron." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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