ENSG00000075043


Homo sapiens

Features
Gene ID: ENSG00000075043
  
Biological name :KCNQ2
  
Synonyms : KCNQ2 / O43526 / potassium voltage-gated channel subfamily Q member 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: q13.33
Gene start: 63400210
Gene end: 63472677
  
Corresponding Affymetrix probe sets: 205737_at (Human Genome U133 Plus 2.0 Array)   210508_s_at (Human Genome U133 Plus 2.0 Array)   211486_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000359244
Ensembl peptide - ENSP00000353668
Ensembl peptide - ENSP00000486040
Ensembl peptide - ENSP00000490734
Ensembl peptide - ENSP00000490142
Ensembl peptide - ENSP00000487563
Ensembl peptide - ENSP00000487469
Ensembl peptide - ENSP00000487384
Ensembl peptide - ENSP00000487142
Ensembl peptide - ENSP00000486706
Ensembl peptide - ENSP00000486509
Ensembl peptide - ENSP00000486194
Ensembl peptide - ENSP00000339611
Ensembl peptide - ENSP00000345523
Ensembl peptide - ENSP00000349789
Ensembl peptide - ENSP00000352035
NCBI entrez gene - 3785     See in Manteia.
OMIM - 602235
RefSeq - XM_017027844
RefSeq - NM_004518
RefSeq - NM_172106
RefSeq - NM_172107
RefSeq - NM_172108
RefSeq - NM_172109
RefSeq - XM_011528810
RefSeq - XM_011528811
RefSeq - XM_017027841
RefSeq - XM_017027842
RefSeq - XM_017027843
RefSeq Peptide - NP_742104
RefSeq Peptide - NP_742105
RefSeq Peptide - NP_742106
RefSeq Peptide - NP_004509
RefSeq Peptide - NP_742107
swissprot - O43526
swissprot - A0A0G2JH35
swissprot - A0A0D9SGJ7
swissprot - A0A0D9SGG3
swissprot - A0A0D9SGD4
swissprot - A0A0D9SG49
swissprot - A0A0D9SFE0
swissprot - A0A0D9SF10
swissprot - A0A1B0GUK1
swissprot - Q4VXP6
swissprot - Q53Y30
swissprot - A0A0D9SEV1
swissprot - A0A1B0GW14
Ensembl - ENSG00000075043
  
Related genetic diseases (OMIM): 121200 - Myokymia, 121200
  613720 - Epileptic encephalopathy, early infantile, 7, 613720
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 kcnq2bENSDARG00000091130Danio rerio
 KCNQ2ENSGALG00000005822Gallus gallus
 Kcnq2ENSMUSG00000016346Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KCNQ3 / O43525 / potassium voltage-gated channel subfamily Q member 3ENSG0000018415647
KCNQ5 / Q9NR82 / potassium voltage-gated channel subfamily Q member 5ENSG0000018576046
KCNQ4 / P56696 / potassium voltage-gated channel subfamily Q member 4ENSG0000011701342
KCNQ1 / P51787 / potassium voltage-gated channel subfamily Q member 1ENSG0000005391829


Protein motifs (from Interpro)
Interpro ID Name
 IPR003937  Potassium channel, voltage dependent, KCNQ
 IPR003947  Potassium channel, voltage dependent, KCNQ2
 IPR005821  Ion transport domain
 IPR013099  Potassium channel domain
 IPR013821  Potassium channel, voltage dependent, KCNQ, C-terminal
 IPR020969  Ankyrin-G binding site
 IPR028325  Voltage-gated potassium channel


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006813 potassium ion transport IEA
 biological_processGO:0007268 chemical synaptic transmission TAS
 biological_processGO:0007399 nervous system development TAS
 biological_processGO:0034220 ion transmembrane transport IEA
 biological_processGO:0034765 regulation of ion transmembrane transport IEA
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0071805 potassium ion transmembrane transport IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0008076 voltage-gated potassium channel complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0033268 node of Ranvier ISS
 cellular_componentGO:0043194 axon initial segment ISS
 molecular_functionGO:0005216 ion channel activity IEA
 molecular_functionGO:0005244 voltage-gated ion channel activity IEA
 molecular_functionGO:0005249 voltage-gated potassium channel activity IEA
 molecular_functionGO:0005267 potassium channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005516 calmodulin binding IDA
 molecular_functionGO:0030506 ankyrin binding IPI


Pathways (from Reactome)
Pathway description
Voltage gated Potassium channels
Interaction between L1 and Ankyrins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
Show

 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000490 Deep set eyes 
Show

 HP:0000504 Abnormality of vision "Abnormality of eyesight (visual perception)." [HPO:curators]
Show

 HP:0000738 Hallucinations 
Show

 HP:0000980 Pallor 
Show

 HP:0001041 Facial erythema 
Show

 HP:0001249 Mental retardation 
Show

 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
Show

 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
Show

 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
Show

 HP:0001266 Choreoathetosis 
Show

 HP:0001270 Motor retardation 
Show

 HP:0001276 Hypertonia 
Show

 HP:0001285 Spastic tetraparesis "Spastic weakness affecting all four limbs." [HPO:curators]
Show

 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
Show

 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
Show

 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
Show

 HP:0001425 Heterogeneous 
Show

 HP:0002017 Nausea and vomiting 
Show

 HP:0002059 Cerebral atrophy 
Show

 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
Show

 HP:0002076 Migraine 
Show

 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
Show

 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
Show

 HP:0002181 Cerebral edema "Abnormal accumulation of fluid in the brain." [HPO:curators]
Show

 HP:0002266 Focal clonic seizures 
Show

 HP:0002354 Memory impairment 
Show

 HP:0002357 Dysphasia 
Show

 HP:0002373 Febrile seizures "Febrile seizures are convulsions induced by a fever in infants or small children and are generally characterized by loss of consciousness and tonic-clonic movements. Most febrile seizures last a minute or two." [HPO:curators]
Show

 HP:0002411 Myokymia 
Show

 HP:0002453 Abnormality of the globus pallidus 
Show

 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
Show

 HP:0002540 Inability to walk 
Show

 HP:0003593 Early onset 
Show

 HP:0003623 Onset in neonatal period 
Show

 HP:0003812 Phenotypic variability 
Show

 HP:0004372 Reduced consciousness/confusion 
Show

 HP:0007015 Poor fine and gross motor coordination 
Show

 HP:0010818 Tonic seizures "A type of `seizure` (HP:0001250) characterized by a sudden increase in muscle tone whereby the body, arms, or legs make sudden stiffening movements and consciousness is usually preserved. Tonic seizures can occur during sleep. Tonic seizures usually affect both sides of the body, and cause a fall if the affected person was standing when the seizure started." [HPO:probinson]
Show

 HP:0010851 EEG: burst suppression "The burst suppression pattern in electroencephalography refers to a characteristic periodic pattern of low voltage (<10 microvolts) suppressed background and a relatively shorter pattern of higher amplitude slow, sharp, and spiking complexes." [HPO:probinson]
Show

 HP:0011097 Epileptic spasms "A sudden flexion, extension or mixed extension-flexion of predominantly proximal and truncal muscles which is usually more sustained than a myoclonic movement but not as sustained as a tonic seizure." [HPO:jalbers]
Show

 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
Show

 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
Show

 HP:0012534 Dysesthesia "Abnormal sensations with no apparent physical cause that are painful or unpleasant." [ORCID:0000-0001-5208-3432]
Show

 HP:0012736 Profound global developmental delay "A profound delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
Show

 HP:0100543 Cognitive impairment "Abnormality in the process of thought including the ability to process information." [HPO:sdoelken]
Show

 HP:0100660 Dyskinesis "A movement disorder which consists of effects including diminished voluntary movements and the presence of involuntary movements." [HPO:sdoelken]
Show

 HP:0200134 Epileptic encephalopathy 
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000145362 ANK2 / Q01484 / ankyrin 2  / complex / reaction
 ENSG00000029534 ANK1 / P16157 / ankyrin 1  / reaction / complex
 ENSG00000163531 NFASC / O94856 / neurofascin  / complex / reaction
 ENSG00000184009 ACTG1 / P63261 / actin gamma 1  / reaction / complex
 ENSG00000075624 ACTB / P60709 / actin beta  / reaction / complex
 ENSG00000197694 Q13813 / SPTAN1 / spectrin alpha, non-erythrocytic 1  / reaction / complex
 ENSG00000091129 NRCAM / Q92823 / neuronal cell adhesion molecule  / reaction / complex
 ENSG00000163554 SPTA1 / P02549 / spectrin alpha, erythrocytic 1  / reaction / complex






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr