ENSG00000184009


Homo sapiens

Features
Gene ID: ENSG00000184009
  
Biological name :ACTG1
  
Synonyms : ACTG1 / actin gamma 1 / P63261
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.3
Gene start: 81509971
Gene end: 81523847
  
Corresponding Affymetrix probe sets: 201550_x_at (Human Genome U133 Plus 2.0 Array)   211970_x_at (Human Genome U133 Plus 2.0 Array)   211983_x_at (Human Genome U133 Plus 2.0 Array)   211995_x_at (Human Genome U133 Plus 2.0 Array)   212363_x_at (Human Genome U133 Plus 2.0 Array)   212988_x_at (Human Genome U133 Plus 2.0 Array)   213214_x_at (Human Genome U133 Plus 2.0 Array)   221607_x_at (Human Genome U133 Plus 2.0 Array)   224585_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000477968
Ensembl peptide - ENSP00000493648
Ensembl peptide - ENSP00000331514
Ensembl peptide - ENSP00000458162
Ensembl peptide - ENSP00000458435
Ensembl peptide - ENSP00000459119
Ensembl peptide - ENSP00000459124
Ensembl peptide - ENSP00000460464
Ensembl peptide - ENSP00000460660
Ensembl peptide - ENSP00000461407
Ensembl peptide - ENSP00000461672
Ensembl peptide - ENSP00000462823
Ensembl peptide - ENSP00000466346
NCBI entrez gene - 71     See in Manteia.
OMIM - 102560
RefSeq - NM_001614
RefSeq - NM_001199954
RefSeq Peptide - NP_001186883
RefSeq Peptide - NP_001605
swissprot - J3KT65
swissprot - K7EM38
swissprot - I3L1U9
swissprot - P63261
swissprot - I3L3I0
swissprot - I3L3R2
swissprot - I3L4N8
Ensembl - ENSG00000184009
  
Related genetic diseases (OMIM): 604717 - Deafness, autosomal dominant 20/26, 604717
  614583 - Baraitser-Winter syndrome 2, 614583
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 actb1ENSDARG00000037746Danio rerio
 actb2ENSDARG00000037870Danio rerio
 Actg1ENSMUSG00000062825Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACTB / P60709 / actin betaENSG0000007562499
ACTA2 / P62736 / actin, alpha 2, smooth muscle, aortaENSG0000010779694
ACTG2 / P63267 / actin, gamma 2, smooth muscle, entericENSG0000016301794
ACTC1 / P68032 / actin, alpha, cardiac muscle 1ENSG0000015925194
ACTA1 / P68133 / actin, alpha 1, skeletal muscleENSG0000014363294
ACTBL2 / Q562R1 / actin, beta like 2ENSG0000016906791
POTEJ / P0CG39 / POTE ankyrin domain family member JENSG0000022203890
ACTR1B / P42025 / ARP1 actin related protein 1 homolog BENSG0000011507355
ACTR1A / P61163 / ARP1 actin related protein 1 homolog AENSG0000013810754
ACTRT3 / Q9BYD9 / actin related protein T3ENSG0000018437849
ACTRT1 / Q8TDG2 / actin related protein T1ENSG0000012316548
ACTRT2 / Q8TDY3 / actin related protein T2ENSG0000016971748
ACTL7B / Q9Y614 / actin like 7BENSG0000014815644
ACTL7A / Q9Y615 / actin like 7AENSG0000018700343
ACTL9 / Q8TC94 / actin like 9ENSG0000018178642


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR004001  Actin, conserved site
 IPR020902  Actin/actin-like conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001895 retina homeostasis HEP
 biological_processGO:0009612 response to mechanical stimulus IEA
 biological_processGO:0034329 cell junction assembly TAS
 biological_processGO:0038096 Fc-gamma receptor signaling pathway involved in phagocytosis TAS
 biological_processGO:0045214 sarcomere organization IEA
 biological_processGO:0048010 vascular endothelial growth factor receptor signaling pathway TAS
 biological_processGO:0048013 ephrin receptor signaling pathway TAS
 biological_processGO:0051592 response to calcium ion IEA
 biological_processGO:0061024 membrane organization TAS
 biological_processGO:0070527 platelet aggregation HMP
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005634 nucleus HDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton ISS
 cellular_componentGO:0005884 actin filament IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005925 focal adhesion ISS
 cellular_componentGO:0015629 actin cytoskeleton IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030016 myofibril IEA
 cellular_componentGO:0031941 filamentous actin IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 cellular_componentGO:0070062 extracellular exosome IDA
 cellular_componentGO:0072562 blood microparticle HDA
 cellular_componentGO:0097433 dense body ISS
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton IC
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005522 profilin binding IDA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0042802 identical protein binding IPI


Pathways (from Reactome)
Pathway description
Translocation of SLC2A4 (GLUT4) to the plasma membrane
Gap junction degradation
Formation of annular gap junctions
Regulation of actin dynamics for phagocytic cup formation
EPHB-mediated forward signaling
EPH-ephrin mediated repulsion of cells
Adherens junctions interactions
Recycling pathway of L1
VEGFA-VEGFR2 Pathway
Interaction between L1 and Ankyrins
Cell-extracellular matrix interactions
RHO GTPases activate IQGAPs
RHO GTPases Activate WASPs and WAVEs
RHO GTPases Activate Formins
MAP2K and MAPK activation
Signaling by moderate kinase activity BRAF mutants
Signaling by high-kinase activity BRAF mutants
Signaling by RAS mutants
Signaling by BRAF and RAF fusions
Paradoxical activation of RAF signaling by kinase inactive BRAF
Clathrin-mediated endocytosis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000072 Hydroureter "The distention of the ureter with urine." [HPO:curators]
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 HP:0000126 Hydronephrosis 
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000202 Cleft lip/palate 
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 HP:0000219 Thin upper lip 
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 HP:0000233 Thin vermillion border 
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 HP:0000239 Large fontanelles "In newborns, the two frontal bones, two parietal bones, and one occipital bone are joined by fibrous sutures, which form a small posterior fontanelle, and a larger, diamond-shaped anterior fontanelle. These regions allow for the skull to pass the birth canal and for later growth. The fontanelles gradually ossify, whereby the posterior fontanelle usually closes by eight weeks and the anterior fontanelle by the 9th to 16th month of age. Large fontanelles are diagnosed if the fontanelles are larger than age-dependent norms." [HPO:curators]
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 HP:0000243 Trigonocephaly 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000270 Delayed closure of fontanelles "Infants normally have two fontanels at birth, the diamond-shaped anterior fontanelle at the junction of the coronal and sagittal sutures, and the posterior fontanelle at the intersection of the occipital and parietal bones. The posterior fontanelle usually closes by the 8th week of life, and the anterior fontanel closes by the 18th month of life on average. This term applies if there is delay of closure of the fontanelles beyond the normal age." [HPO:curators]
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 HP:0000278 Retrognathia 
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 HP:0000280 Coarse facial features 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000293 Full cheeks 
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 HP:0000307 Pointed chin 
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 HP:0000316 Hypertelorism 
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 HP:0000343 Long philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000377 Abnormal form of ears "Abnormal form of the out part of the ear (also referred to as the auricle or pinna)." [HPO:curators]
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 HP:0000408 Hearing loss, sensorineural, progressive 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000437 Flat nasal tip 
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 HP:0000445 Broad nose 
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 HP:0000448 Prominent nose 
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 HP:0000465 Webbed neck 
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 HP:0000470 Short neck 
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 HP:0000482 Microcornea "A congenital abnormality of the `cornea` (FMA:58238) in which the cornea and the anterior segment of the eye are smaller than normal. The horizontal diameter of the cornea does not reach 10 mm even in adulthood." [HPO:probinson]
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 HP:0000494 Downward slanting palpebral fissures 
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 HP:0000506 Telecanthus "An abnormally increased distance between the medial canthi (angle between eyelids) of the eyelids." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000568 Microphthalmos "A developmental anomaly characterized by abnormal smallness of one or both eyes." [HPO:curators]
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 HP:0000588 Optic nerve coloboma 
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 HP:0000589 Coloboma "A developmental defect characterized by a cleft of some portion of the `eye` (FMA:54448`) or ocular adnexa." [HPO:probinson]
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 HP:0000612 Iris coloboma "A `coloboma` (HP:0000589) of the `iris` (FMA:58235)." [HPO:probinson]
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 HP:0000637 Wide palpebral fissures 
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 HP:0001100 Heterochromia iridis "Heterochromia iridis is a difference in the color of the iris in the two eyes." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001302 Pachygyria "A congenital abnormality of the cerebral hemisphere chacterized by unusually thick gyrations (convolutions) of the cerebral cortex." [HPO:curators]
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 HP:0001328 Learning disability 
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 HP:0001339 Lissencephaly "A congenital absence of the convolutions of the cerebral cortex and a poorly formed sylvian fissure." [HPO:curators]
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001510 Growth retardation 
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 HP:0002000 Columella, short "Reduced distance from the anterior border of the naris to the subnasale." [pmid:19152422]
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 HP:0002119 Ventriculomegaly 
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 HP:0002126 Polymicrogyria "A congenital abnormality of the cerebral hemisphere characterized by an excessive number of small gyri (convolutions) on the surface of the brain." [HPO:curators]
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 HP:0002162 Low posterior hairline 
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 HP:0002300 Mutism 
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 HP:0002326 Transient ischemic attack 
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 HP:0002357 Dysphasia 
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 HP:0002381 Aphasia 
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 HP:0002553 Arched eyebrows 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002652 Skeletal dysplasia 
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 HP:0003189 Long nose 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005484 Microcephaly, postnatal 
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 HP:0005487 Prominent metopic suture "A prominent persistent frontal suture (metopic suture)." [HPO:curators]
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 HP:0007227 Brain macrogyria and polymicrogyria 
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 HP:0008619 Hearing loss, sensorineural, bilateral 
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 HP:0009942 Partial/complete duplication of phalanges of the thumb "Complete or partial duplication of the phalanges of the thumb. Depending on the severity, the appearance on x-ray can vary from a notched phalanx (the duplicated bone is almost completely fused with the phalanx), a partially fused appearance of the two bones (bifid), two separate bones appearing side to side, or completely duplicated phalanges (proximal and distal phalanx of the thumb and/or 1st metacarpal). In contrast to the phalanges of the digits 2-5 (proximal, middle and distal), the proximal phalanx of the thumb is embryologically equivalent to the middle phalanges of the other digits, whereas the first metacarpal is embryologically of phalangeal origin and as such equivalent to the proximal phalanges of the other digits." [HPO:sdoelken]
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 HP:0010529 Echolalia "The tendency to repeat vocalizations made by another person." [HPO:curators]
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 HP:0011462 Young adult onset "Onset of disease at the age of between 15 and 40 years." [DDD:hfirth]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012157 Subcortical cerebral atrophy "Atrophy of the cerebral subcortical white and gray matter, termed subcortical atrophy, reflects loss of nerve cells in the basal ganglia or fibers in the deep white matter." [HPO:probinson, pmid:20813998]
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 HP:0012905 Euryblepharon "Euryblepharon is a congenital eyelid anomaly characterized by horizontal enlargement of the palpebral fissure. The eyelid is shortened vertically compared with the horizontal dimension, with associated lateral canthal malpositioning and lateral ectropion abnormally wide lid opening." [HPO:probinson, pmid:15249382, pmid:15530943, pmid:24719364]
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 HP:0030502 Retinoschisis "Splitting of the neuroretinal layers of the retina." [HPO:probinson]
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 HP:0040188 Osteochondrosis "Abnormal growth ossification centers in children. Initially a degeneration/ necrosis followed by regeneration or recalcification." []
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 HP:0100308 Cerebral cortical hemiatrophy 
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 HP:0100540 Palpebral edema 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000006451 RALA / P11233 / RAS like proto-oncogene A  / reaction / complex
 ENSG00000090776 EFNB1 / P98172 / ephrin B1  / reaction / complex
 ENSG00000108947 EFNB3 / Q15768 / ephrin B3  / complex / reaction
 ENSG00000106299 WASL / O00401 / Wiskott-Aldrich syndrome like  / reaction / complex
 ENSG00000125266 EFNB2 / P52799 / ephrin B2  / reaction / complex
 ENSG00000106211 HSPB1 / P04792 / heat shock protein family B (small) member 1  / complex
 ENSG00000125414 MYH2 / Q9UKX2 / myosin heavy chain 2  / complex
 ENSG00000131504 DIAPH1 / O60610 / diaphanous related formin 1  / reaction / complex
 ENSG00000145362 ANK2 / Q01484 / ankyrin 2  / complex / reaction
 ENSG00000067560 RHOA / P61586 / ras homolog family member A  / reaction / complex
 ENSG00000029534 ANK1 / P16157 / ankyrin 1  / complex / reaction
 ENSG00000145555 MYO10 / Q9HD67 / myosin X  / reaction / complex
 ENSG00000155366 RHOC / P08134 / ras homolog family member C  / complex / reaction
 ENSG00000163531 NFASC / O94856 / neurofascin  / complex
 ENSG00000161791 FMNL3 / Q8IVF7 / formin like 3  / reaction / complex
 ENSG00000070831 CDC42 / P60953 / cell division cycle 42  / reaction / complex
 ENSG00000175866 BAIAP2 / Q9UQB8 / BAI1 associated protein 2  / reaction / complex
 ENSG00000184009 ACTG1 / P63261 / actin gamma 1  / - / complex / reaction
 ENSG00000197879 MYO1C / O00159 / myosin IC  / reaction / complex
 ENSG00000105711 SCN1B / Q07699 / sodium voltage-gated channel beta subunit 1  / reaction / complex
 ENSG00000128591 FLNC / Q14315 / filamin C  / complex / reaction
 ENSG00000092820 EZR / ezrin / P15311  / complex / reaction
 ENSG00000198910 L1CAM / P32004 / L1 cell adhesion molecule  / reaction / complex
 ENSG00000183873 SCN5A / Q14524 / sodium voltage-gated channel alpha subunit 5  / reaction / complex
 ENSG00000198668 CALM1 / P0DP23 / calmodulin 1  / complex / reaction
 ENSG00000187164 SHTN1 / A0MZ66 / shootin 1  / reaction / complex
 ENSG00000075043 KCNQ2 / O43526 / potassium voltage-gated channel subfamily Q member 2  / reaction / complex
 ENSG00000197694 Q13813 / SPTAN1 / spectrin alpha, non-erythrocytic 1  / complex
 ENSG00000196405 EVL / Q9UI08 / Enah/Vasp-like  / complex / reaction
 ENSG00000162458 FBLIM1 / Q8WUP2 / filamin binding LIM protein 1  / reaction / complex
 ENSG00000196588 MKL1 / Q969V6 / megakaryoblastic leukemia (translocation) 1  / complex / reaction
 ENSG00000075624 ACTB / P60709 / actin beta  / complex / reaction / -
 ENSG00000266028 O75044 / SRGAP2 / SLIT-ROBO Rho GTPase activating protein 2  / complex / reaction
 ENSG00000130396 AFDN / P55196 / afadin, adherens junction formation factor  / reaction / complex
 ENSG00000157827 FMNL2 / Q96PY5 / formin like 2  / complex / reaction
 ENSG00000184156 KCNQ3 / O43525 / potassium voltage-gated channel subfamily Q member 3  / reaction / complex
 ENSG00000140575 IQGAP1 / P46940 / IQ motif containing GTPase activating protein 1  / reaction / complex
 ENSG00000145703 IQGAP2 / Q13576 / IQ motif containing GTPase activating protein 2  / complex / reaction
 ENSG00000183856 IQGAP3 / Q86VI3 / IQ motif containing GTPase activating protein 3  / reaction / complex
 ENSG00000196924 FLNA / P21333 / filamin A  / reaction / complex
 ENSG00000136238 RAC1 / P63000 / Rac family small GTPase 1  / complex / reaction
 ENSG00000184922 FMNL1 / O95466 / formin like 1  / complex / reaction
 ENSG00000163554 SPTA1 / P02549 / spectrin alpha, erythrocytic 1  / complex
 ENSG00000091129 NRCAM / Q92823 / neuronal cell adhesion molecule  / complex
 ENSG00000205726 ITSN1 / Q15811 / intersectin 1  / reaction / complex






 

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