ENSG00000143632


Homo sapiens

Features
Gene ID: ENSG00000143632
  
Biological name :ACTA1
  
Synonyms : ACTA1 / actin, alpha 1, skeletal muscle / P68133
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q42.13
Gene start: 229431245
Gene end: 229434098
  
Corresponding Affymetrix probe sets: 203872_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000355644
Ensembl peptide - ENSP00000355645
NCBI entrez gene - 58     See in Manteia.
OMIM - 102610
RefSeq - NM_001100
RefSeq Peptide - NP_001091
swissprot - A6NL76
swissprot - P68133
Ensembl - ENSG00000143632
  
Related genetic diseases (OMIM): 161800 - Myopathy, actin, congenital, with cores, 161800
  255310 - Myopathy, congenital, with fiber-type disproportion 1, 255310
  616852 - ?Myopathy, scapulohumeroperoneal, 616852
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Acta1ENSMUSG00000031972Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ACTC1 / P68032 / actin, alpha, cardiac muscle 1ENSG0000015925199
ACTG2 / P63267 / actin, gamma 2, smooth muscle, entericENSG0000016301798
ACTA2 / P62736 / actin, alpha 2, smooth muscle, aortaENSG0000010779698
ACTB / P60709 / actin betaENSG0000007562493
ACTG1 / P63261 / actin gamma 1ENSG0000018400993
ACTBL2 / Q562R1 / actin, beta like 2ENSG0000016906788
POTEJ / P0CG39 / POTE ankyrin domain family member JENSG0000022203885
ACTR1B / P42025 / ARP1 actin related protein 1 homolog BENSG0000011507353
ACTR1A / P61163 / ARP1 actin related protein 1 homolog AENSG0000013810752
ACTRT3 / Q9BYD9 / actin related protein T3ENSG0000018437848
ACTRT2 / Q8TDY3 / actin related protein T2ENSG0000016971747
ACTRT1 / Q8TDG2 / actin related protein T1ENSG0000012316547
ACTL7A / Q9Y615 / actin like 7AENSG0000018700342
ACTL7B / Q9Y614 / actin like 7BENSG0000014815642
ACTL9 / Q8TC94 / actin like 9ENSG0000018178640


Protein motifs (from Interpro)
Interpro ID Name
 IPR004000  Actin family
 IPR004001  Actin, conserved site
 IPR020902  Actin/actin-like conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006936 muscle contraction TAS
 biological_processGO:0009612 response to mechanical stimulus IEA
 biological_processGO:0009991 response to extracellular stimulus IEA
 biological_processGO:0010226 response to lithium ion IEA
 biological_processGO:0010628 positive regulation of gene expression ISS
 biological_processGO:0030049 muscle filament sliding TAS
 biological_processGO:0030240 skeletal muscle thin filament assembly IMP
 biological_processGO:0043503 skeletal muscle fiber adaptation IEA
 biological_processGO:0048545 response to steroid hormone IEA
 biological_processGO:0048741 skeletal muscle fiber development IEA
 biological_processGO:0071417 cellular response to organonitrogen compound IEA
 biological_processGO:0090131 mesenchyme migration ISS
 cellular_componentGO:0001725 stress fiber IDA
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005865 striated muscle thin filament IDA
 cellular_componentGO:0005884 actin filament IDA
 cellular_componentGO:0015629 actin cytoskeleton IMP
 cellular_componentGO:0030017 sarcomere IDA
 cellular_componentGO:0030027 lamellipodium ISS
 cellular_componentGO:0030175 filopodium ISS
 cellular_componentGO:0044297 cell body ISS
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0072562 blood microparticle HDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005200 structural constituent of cytoskeleton TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0017022 myosin binding TAS
 molecular_functionGO:0043531 ADP binding TAS


Pathways (from Reactome)
Pathway description
Striated Muscle Contraction


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000275 Narrow face 
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 HP:0000276 Long face 
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 HP:0000278 Retrognathia 
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 HP:0000298 Mask-like facies 
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 HP:0000467 Neck muscle weakness 
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 HP:0000473 Torticollis 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000602 Ophthalmoplegia 
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 HP:0000767 Pectus excavatum "A defect of the chest wall characterized by a depression of the sternum, giving the chest ("pectus") a caved-in ("excavatum") appearance." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001265 Hyporeflexia 
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 HP:0001270 Motor retardation 
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 HP:0001276 Hypertonia 
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 HP:0001283 Bulbar palsy "Bulbar weakness (or bulbar palsy) refers to bilateral impairment of function of the lower cranial nerves IX, X, XI and XII, which occurs due to lower motor neuron lesion either at nuclear or fascicular level in the medulla or from bilateral lesions of the lower cranial nerves outside the brain-stem. Bulbar weakness is often associated with difficulty in chewing, weakness of the facial muscles, dysarthria, palatal weakness and regurgitation of fluids, dysphagia, and dysphonia." [HPO:curators]
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 HP:0001284 Areflexia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001315 Reduced reflexes 
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 HP:0001319 Neonatal hypotonia "Muscular hypotonia (abnormally low muscle tone) manifesting in the neonatal period." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001374 Congenital hip dislocation 
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 HP:0001425 Heterogeneous 
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 HP:0001508 Failure to thrive 
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 HP:0001533 Asthenic habitus "Asthenic habitus refers to a slender build with long limbs, an angular profile, and prominent muscles or bones." [HPO:curators]
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 HP:0001558 Decreased fetal movement "An abnormal reduction in quantity or strength of fetal movements." [HPO:curators]
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 HP:0001561 Polyhydramnios 
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 HP:0001612 Weak cry 
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 HP:0001644 Dilated cardiomyopathy 
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 HP:0001761 Pes cavus 
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 HP:0001771 Achilles tendon contractures 
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 HP:0002015 Dysphagia "Difficulty in swallowing." [HPO:curators]
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 HP:0002058 Myopathic facies "A facial appearance characteristic of myopathic conditions. The face appears expressionless with sunken cheeks, bilateral ptosis, and inability to elevate the corners of the mouth, due to muscle weakness." [HPO:curators]
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 HP:0002063 Rigidity 
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 HP:0002090 Pneumonia 
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 HP:0002093 Respiratory insufficiency 
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 HP:0002205 Recurrent respiratory infections 
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 HP:0002359 Frequent falls 
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 HP:0002421 Poor head control 
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 HP:0002460 Distal muscle weakness "Reduced strength of the distal musculature." [HPO:curators]
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 HP:0002515 Waddling gait 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002747 Respiratory insufficiency due to muscle weakness 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002938 Lumbar hyperlordosis 
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 HP:0002987 Elbow contractures 
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 HP:0003089 Hamstring contractures 
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 HP:0003121 Limb contractures 
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 HP:0003198 Myopathy 
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 HP:0003202 Amyotrophy "The presence of muscular atrophy (which is also known as amyotrophy)." [HPO:curators]
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 HP:0003236 Elevated serum creatine phosphokinase 
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 HP:0003273 Hip contractures 
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 HP:0003306 Spinal rigidity 
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 HP:0003307 Hyperlordosis 
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 HP:0003323 Muscle weakness, progressive 
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 HP:0003324 Generalized muscle weakness "Generalized weakness or decreased strength of the muscles." [HPO:curators]
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 HP:0003327 Axial muscle weakness "Reduced strength of the axial musculature (i.e., of the muscles of the head and neck, spine, and ribs)." [HPO:curators]
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 HP:0003391 Gower sign "A phenomen whereby patients are not able to stand up without the use of the hands owing to weakness of the proximal muscles of the lower limbs." [HPO:probinson]
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 HP:0003445 EMG shows neuropathic changes 
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 HP:0003458 EMG myopathic abnormalities "The presence of abnormal electromyographic patterns indicative of myopathy, such as small-short polyphasic motor unit potentials." [HPO:curators]
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 HP:0003551 Difficulty climbing stairs 
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 HP:0003555 Muscle fiber splitting "Fiber splitting or branching is a common finding in human and rat skeletal muscle pathology. Fiber splitting refers to longitudinal halving of the complete fiber, while branching originates from a regenerating end of a necrotic fiber as invaginations of the sarcolemma. In fiber branching, one end of the fiber remains intact as a single entity, while the other end has several branches." [pmid:6123177]
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 HP:0003557 Increased variability in muscle fiber size "An abnormally high degree of muscle fiber size variation. This phenotypic feature can be observed upon muscle biopsy." [HPO:curators]
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 HP:0003577 Onset at birth 
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 HP:0003677 Slow progression 
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 HP:0003687 Centralized nuclei 
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 HP:0003690 Limb muscle weakness "Weakness of the muscles of the arms and legs." [HPO:curators]
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 HP:0003691 Scapular winging 
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 HP:0003701 Proximal muscle weakness "A lack of strength of the proximal muscles." [HPO:curators]
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 HP:0003713 Muscle fiber necrosis "Abnormal cell death involving muscle fibers usually associated with break in, or absence of, muscle surface fiber membrane and resulting in irreversible damage to muscle fibers." [HPO:curators]
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 HP:0003715 Muscle biopsy shows myofibrillar myopathy 
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 HP:0003722 Neck flexor weakness "Weakness of the muscles involved in neck flexion (sternocleidomastoid, longus capitus, longus colli, and scalenus anterior)." [HPO:curators]
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 HP:0003736 Autophagic vacuoles 
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 HP:0003755 Type 1 fibers are at least 12% smaller than type 2 fibers "The presence of abnormal muscle fiber size such that type 1 fibers are at least 12% smaller than type 2 fibers (in general, this feature can only be observed on muscle biopsy)." [HPO:curators]
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 HP:0003798 Nemaline bodies "Nemaline rods are abnormal bodies are abnormal that can occur in skeletal muscle fibers. THe rods can be observed on histological analysis of muscle biopsy tissue or upon electron microscopy, where they appear either as extensions of sarcomeric Z-lines, in random array without obvious attachment to Z-lines (often in areas devoid of sarcomeres) or in large clusters localized at the sarcolemma or intermyofibrillar spaces." [HPO:curators, pmid:11333380]
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 HP:0003803 Type 1 muscle fiber predominance "An abnormal predominance of type I muscle fibers (in general, this feature can only be observed on muscle biopsy)." [HPO:curators]
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 HP:0003805 Rimmed vacuoles 
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 HP:0003810 Distal muscle weakness occurs later 
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 HP:0003812 Phenotypic variability 
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 HP:0003828 Variable expressivity 
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 HP:0006785 Limb-girdle muscular dystrophy "Muscular dystrophy affecting the muscles of the limb girdle (the hips and shoulders)." [HPO:curators]
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 HP:0008180 Mildly elevated creatine phosphokinase 
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 HP:0008872 Feeding problems in infancy 
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 HP:0009025 Increased connective tissue "The presence of an abnormally increased amount of connective tissue." [HPO:curators]
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 HP:0009027 Foot dorsiflexor weakness 
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 HP:0009130 Amyotrophy involving the musculature of the hand "Muscular atrophy involving the muscles of the hand." [HPO:curators]
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 HP:0010628 Facial muscle weakness "A weakness of any or all of the muscles of the face of any etiology." [HPO:curators]
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 HP:0011968 Feeding difficulties "Impaired ability to eat related to problems gathering food and getting ready to suck, chew, or swallow it." [ISCA:eriggs]
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 HP:0012899 Handgrip myotonia "Difficulty releasing one s grip associated with prolonged first handgrip relaxation times." [pmid:22987687, UToronto:htrang]
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 HP:0030878 Abnormality on pulmonary function testing "Any anomaly measure by pulmonary function testing, which includes spirometry, measures of diffusing capacity, and plethysmography." [HPO:probinson]
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 HP:0031189 Wrist drop "A condition in which the affected individual cannot extend the wrist, which hangs flaccidly." []
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 HP:0031546 Cardiac conduction abnormality "Any anomaly of the progression of electrical impulses through the heart." []
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000159251 ACTC1 / P68032 / actin, alpha, cardiac muscle 1  / -
 ENSG00000143632 ACTA1 / P68133 / actin, alpha 1, skeletal muscle  / -






 

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