ENSG00000104490


Homo sapiens

Features
Gene ID: ENSG00000104490
  
Biological name :NCALD
  
Synonyms : NCALD / neurocalcin delta / P61601
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: -1
Band: q22.3
Gene start: 101686543
Gene end: 102124907
  
Corresponding Affymetrix probe sets: 1562790_at (Human Genome U133 Plus 2.0 Array)   211685_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000428193
Ensembl peptide - ENSP00000428105
Ensembl peptide - ENSP00000428312
Ensembl peptide - ENSP00000430925
Ensembl peptide - ENSP00000430731
Ensembl peptide - ENSP00000430578
Ensembl peptide - ENSP00000430534
Ensembl peptide - ENSP00000430476
Ensembl peptide - ENSP00000430365
Ensembl peptide - ENSP00000430064
Ensembl peptide - ENSP00000429522
Ensembl peptide - ENSP00000429493
Ensembl peptide - ENSP00000429466
Ensembl peptide - ENSP00000429347
Ensembl peptide - ENSP00000429296
Ensembl peptide - ENSP00000429255
Ensembl peptide - ENSP00000429245
Ensembl peptide - ENSP00000429162
Ensembl peptide - ENSP00000428781
Ensembl peptide - ENSP00000428598
Ensembl peptide - ENSP00000220931
Ensembl peptide - ENSP00000310587
Ensembl peptide - ENSP00000379256
Ensembl peptide - ENSP00000428093
NCBI entrez gene - 83988     See in Manteia.
OMIM - 606722
RefSeq - NM_001040630
RefSeq - NM_001040624
RefSeq - NM_001040625
RefSeq - NM_001040626
RefSeq - NM_001040627
RefSeq - NM_001040628
RefSeq - NM_001040629
RefSeq - NM_032041
RefSeq - XM_011517332
RefSeq - XM_011517333
RefSeq - XM_011517334
RefSeq - XM_011517335
RefSeq - XM_017013901
RefSeq - XM_017013902
RefSeq Peptide - NP_001035717
RefSeq Peptide - NP_001035714
RefSeq Peptide - NP_001035715
RefSeq Peptide - NP_001035718
RefSeq Peptide - NP_001035719
RefSeq Peptide - NP_001035720
RefSeq Peptide - NP_114430
RefSeq Peptide - NP_001035716
swissprot - E5RJJ6
swissprot - E5RJF1
swissprot - E5RJA1
swissprot - E5RIZ1
swissprot - E5RIX3
swissprot - E5RIG4
swissprot - E5RIA5
swissprot - E5RI95
swissprot - E5RI78
swissprot - E5RHE8
swissprot - E5RGZ0
swissprot - E5RHC8
swissprot - E5RGA9
swissprot - E5RFL9
swissprot - B2RB70
swissprot - A0A1B0GXG3
swissprot - P61601
swissprot - E5RK89
swissprot - E5RJT1
Ensembl - ENSG00000104490
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ncaldaENSDARG00000070688Danio rerio
 NCALDENSGALG00000032518Gallus gallus
 NcaldENSMUSG00000051359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HPCAL1 / P37235 / hippocalcin like 1ENSG0000011575691
HPCA / P84074 / hippocalcinENSG0000012190588
VSNL1 / P62760 / visinin like 1ENSG0000016303268
HPCAL4 / Q9UM19 / hippocalcin like 4ENSG0000011698365
NCS1 / P62166 / neuronal calcium sensor 1ENSG0000010713058
RCVRN / P35243 / recoverinENSG0000010904749
GUCA1B / Q9UMX6 / guanylate cyclase activator 1BENSG0000011259941
KCNIP2 / Q9NS61 / potassium voltage-gated channel interacting protein 2ENSG0000012004940
KCNIP1 / Q9NZI2 / potassium voltage-gated channel interacting protein 1ENSG0000018213239
KCNIP3 / Q9Y2W7 / potassium voltage-gated channel interacting protein 3ENSG0000011504138
KCNIP4 / Q6PIL6 / potassium voltage-gated channel interacting protein 4ENSG0000018577437
GUCA1A / P43080 / guanylate cyclase activator 1AENSG0000004854537
GUCA1C / O95843 / guanylate cyclase activator 1CENSG0000013847233


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003073 regulation of systemic arterial blood pressure IEA
 biological_processGO:0016192 vesicle-mediated transport NAS
 biological_processGO:0019722 calcium-mediated signaling IEA
 biological_processGO:0034220 ion transmembrane transport IEA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0030130 clathrin coat of trans-Golgi network vesicle NAS
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003779 actin binding IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015276 ligand-gated ion channel activity TAS
 molecular_functionGO:0015631 tubulin binding IDA
 molecular_functionGO:0030276 clathrin binding IDA
 molecular_functionGO:0043014 alpha-tubulin binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Activation of Ca-permeable Kainate Receptor


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr