ENSDARG00000070688


Danio rerio

Features
Gene ID: ENSDARG00000070688
  
Biological name :ncalda
  
Synonyms : ncalda / neurocalcin delta a
  
Possible biological names infered from orthology : NCALD / neurocalcin delta / P61601 / Q91X97
  
Species: Danio rerio
  
Chr. number: 16
Strand: -1
Band:
Gene start: 9833256
Gene end: 9897769
  
Corresponding Affymetrix probe sets: Dr.17557.1.S1_at (Zebrafish Array)   Dr.25300.1.A1_at (Zebrafish Array)   Dr.25645.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000094833
Ensembl peptide - ENSDARP00000124109
Ensembl peptide - ENSDARP00000124634
Ensembl peptide - ENSDARP00000146099
NCBI entrez gene - 556178     See in Manteia.
RefSeq - XM_005173483
RefSeq - NM_001114410
RefSeq Peptide - NP_001107882
swissprot - F1QMZ6
ZFIN ID - ZDB-GENE-080220-28
Ensembl - ENSDARG00000070688
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 NCALDENSGALG00000032518Gallus gallus
 NCALDENSG00000104490Homo sapiens
 NcaldENSMUSG00000051359Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ncaldb / Q6AXL4 / neurocalcin delta bENSDARG0000001133493
hpca / hippocalcinENSDARG0000001839790
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *ENSDARG0000002276385
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000002322867
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000004405366
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*ENSDARG0000007049165
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005522958
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005418658
rcvrn2 / recoverin 2ENSDARG0000001990246
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*ENSDARG0000005222346
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*ENSDARG0000011182746
rcvrn3 / recoverin 3ENSDARG0000000963744
guca1b / guanylate cyclase activator 1B / Q8VBV8* / Q9UMX6* / Guanylyl cyclase-activating protein 2 *ENSDARG0000001339340
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*ENSDARG0000001788039
guca1a / guanylate cyclase activator 1AENSDARG0000001045438
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*ENSDARG0000003480837
si:ch211-245j22.3ENSDARG0000004137936
kcnip2 / Kv channel interacting protein 2 / Q9JJ69* / Q9NS61* / potassium voltage-gated channel interacting protein 2*ENSDARG0000007584636
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*ENSDARG0000003725636
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*ENSDARG0000008810036


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Activation of Ca-permeable Kainate Receptor


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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