Manteia

ENSDARG00000055229

Danio rerio

Features

Gene ID:	ENSDARG00000055229

Biological name :	ncs1a

Synonyms :	ncs1a / neuronal calcium sensor 1a

Possible biological names infered from orthology :	NCS1 / neuronal calcium sensor 1 / P62166 / Q8BNY6

Species:	Danio rerio

Chr. number:	5
Strand:	-1
Band:
Gene start:	32402026
Gene end:	32445835

Corresponding Affymetrix probe sets:	Dr.17404.1.A1_at (Zebrafish Array) DrAffx.1.78.S1_at (Zebrafish Array)

Cross references:	Ensembl peptide - ENSDARP00000072016 Ensembl peptide - ENSDARP00000136419 NCBI entrez gene - 393437 See in Manteia. swissprot - F1R8V7 swissprot - Q804C0 ZFIN ID - ZDB-GENE-021220-1 Ensembl - ENSDARG00000055229

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
NCS1	ENSGALG00000012710	Gallus gallus
NCS1	ENSG00000107130	Homo sapiens
Ncs1	ENSMUSG00000062661	Mus musculus

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*	ENSDARG00000054186	96
ncaldb / Q6AXL4 / neurocalcin delta b	ENSDARG00000011334	60
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *	ENSDARG00000022763	59
hpca / hippocalcin	ENSDARG00000018397	59
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*	ENSDARG00000070688	59
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000044053	58
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000023228	57
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*	ENSDARG00000070491	55
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*	ENSDARG00000017880	43
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*	ENSDARG00000052223	42
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*	ENSDARG00000037256	41
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*	ENSDARG00000088100	41
rcvrn2 / recoverin 2	ENSDARG00000019902	40
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*	ENSDARG00000111827	39
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*	ENSDARG00000034808	39
rcvrn3 / recoverin 3	ENSDARG00000009637	37
kcnip2 / Kv channel interacting protein 2 / Q9JJ69* / Q9NS61* / potassium voltage-gated channel interacting protein 2*	ENSDARG00000075846	37
si:ch211-103a14.5 / GUCA1A* / P43080* / P43081* / guanylate cyclase activator 1A* / Guanylyl cyclase-activating protein 1 *	ENSDARG00000100747	35
guca1a / guanylate cyclase activator 1A	ENSDARG00000010454	34
guca1e / guanylate cyclase activator 1e / P43081* / GUCA1A* / P43080* / guanylate cyclase activator 1A* / Guanylyl cyclase-activating protein 1 *	ENSDARG00000101567	33

Protein motifs (from Interpro)

Interpro ID	Name
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0048752	semicircular canal morphogenesis	IMP
biological_process	GO:0060872	semicircular canal development	IGI
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr