ENSDARG00000011334


Danio rerio

Features
Gene ID: ENSDARG00000011334
  
Biological name :ncaldb
  
Synonyms : ncaldb / neurocalcin delta b / Q6AXL4
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 19
Strand: -1
Band:
Gene start: 12297100
Gene end: 12324514
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000019433
Ensembl peptide - ENSDARP00000109673
Ensembl peptide - ENSDARP00000125961
NCBI entrez gene - 445319     See in Manteia.
RefSeq - NM_001003776
RefSeq Peptide - NP_001003776
swissprot - Q6AXL4
ZFIN ID - ZDB-GENE-040808-37
Ensembl - ENSDARG00000011334
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*ENSDARG0000007068893
hpca / hippocalcinENSDARG0000001839786
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *ENSDARG0000002276383
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000002322868
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000004405366
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*ENSDARG0000007049165
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005522959
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005418659
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*ENSDARG0000005222346
rcvrn2 / recoverin 2ENSDARG0000001990244
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*ENSDARG0000011182744
rcvrn3 / recoverin 3ENSDARG0000000963743
guca1b / guanylate cyclase activator 1B / Q8VBV8* / Q9UMX6* / Guanylyl cyclase-activating protein 2 *ENSDARG0000001339339
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*ENSDARG0000001788038
guca1a / guanylate cyclase activator 1AENSDARG0000001045438
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*ENSDARG0000003480838
si:ch211-245j22.3ENSDARG0000004137936
guca1d / guanylate cyclase activator 1d / GUCA1C* / O95843* / guanylate cyclase activator 1C*ENSDARG0000004462936
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*ENSDARG0000008810036
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*ENSDARG0000003725635


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048841 regulation of axon extension involved in axon guidance IGI
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001094 whole organism whole organism absent , abnormal
Show

 ZFA:0009243 CaP motoneuron CaP motoneuron axon increased branchiness , abnormal
CaP motoneuron collateral sprouting increased occurrence , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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