ENSDARG00000023228


Danio rerio

Features
Gene ID: ENSDARG00000023228
  
Biological name :vsnl1a
  
Synonyms : visinin-like 1a / vsnl1a
  
Possible biological names infered from orthology : P62760 / P62761 / visinin like 1 / VSNL1
  
Species: Danio rerio
  
Chr. number: 20
Strand: 1
Band:
Gene start: 35382482
Gene end: 35429737
  
Corresponding Affymetrix probe sets: Dr.15225.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000123522
NCBI entrez gene - 492494     See in Manteia.
RefSeq - NM_001007366
RefSeq Peptide - NP_001007367
swissprot - Q5TZ35
ZFIN ID - ZDB-GENE-041001-211
Ensembl - ENSDARG00000023228
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 VSNL1ENSGALG00000016464Gallus gallus
 VSNL1ENSG00000163032Homo sapiens
 Vsnl1ENSMUSG00000054459Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000004405396
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*ENSDARG0000007049191
hpca / hippocalcinENSDARG0000001839770
ncaldb / Q6AXL4 / neurocalcin delta bENSDARG0000001133469
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*ENSDARG0000007068868
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *ENSDARG0000002276368
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005522957
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005418656
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*ENSDARG0000005222342
rcvrn2 / recoverin 2ENSDARG0000001990242
rcvrn3 / recoverin 3ENSDARG0000000963741
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*ENSDARG0000011182740
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*ENSDARG0000003480839
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*ENSDARG0000003725639
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*ENSDARG0000001788038
kcnip2 / Kv channel interacting protein 2 / Q9JJ69* / Q9NS61* / potassium voltage-gated channel interacting protein 2*ENSDARG0000007584638
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*ENSDARG0000008810038
si:ch211-245j22.3ENSDARG0000004137937
guca1b / guanylate cyclase activator 1B / Q8VBV8* / Q9UMX6* / Guanylyl cyclase-activating protein 2 *ENSDARG0000001339337
guca1a / guanylate cyclase activator 1AENSDARG0000001045435


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR029533  Visinin-like protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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