Manteia

ENSDARG00000009637

Danio rerio

Features

Gene ID:	ENSDARG00000009637

Biological name :	rcvrn3

Synonyms :	rcvrn3 / recoverin 3

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	19
Strand:	1
Band:
Gene start:	10339538
Gene end:	10352579

Corresponding Affymetrix probe sets:	Dr.11072.1.A1_at (Zebrafish Array) NM_200825_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000105300 Ensembl peptide - ENSDARP00000125800 Ensembl peptide - ENSDARP00000126218 NCBI entrez gene - 572207 See in Manteia. RefSeq - NM_200825 RefSeq Peptide - NP_957119 swissprot - I3ITF4 swissprot - Q1LUD3 ZFIN ID - ZDB-GENE-040426-1661 Ensembl - ENSDARG00000009637

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
rcvrn2 / recoverin 2	ENSDARG00000019902	70
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*	ENSDARG00000052223	59
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*	ENSDARG00000111827	53
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*	ENSDARG00000070688	45
ncaldb / Q6AXL4 / neurocalcin delta b	ENSDARG00000011334	43
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *	ENSDARG00000022763	42
hpca / hippocalcin	ENSDARG00000018397	42
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000023228	41
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*	ENSDARG00000070491	41
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000044053	40
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*	ENSDARG00000055229	37
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*	ENSDARG00000054186	36
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*	ENSDARG00000088100	31
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*	ENSDARG00000034808	30
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*	ENSDARG00000017880	30
guca1a / guanylate cyclase activator 1A	ENSDARG00000010454	29
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*	ENSDARG00000037256	29
kcnip2 / Kv channel interacting protein 2 / Q9JJ69* / Q9NS61* / potassium voltage-gated channel interacting protein 2*	ENSDARG00000075846	29
si:ch211-103a14.5 / GUCA1A* / P43080* / P43081* / guanylate cyclase activator 1A* / Guanylyl cyclase-activating protein 1 *	ENSDARG00000100747	28
si:ch211-245j22.3	ENSDARG00000041379	28

Protein motifs (from Interpro)

Interpro ID	Name
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0036368	cone photoresponse recovery	IMP
cellular_component	GO:0005575	cellular_component	ND
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr