Manteia

ENSDARG00000018397

Danio rerio

Features

Gene ID:	ENSDARG00000018397

Biological name :	hpca

Synonyms :	hippocalcin / hpca

Possible biological names infered from orthology :

Species:	Danio rerio

Chr. number:	19
Strand:	-1
Band:
Gene start:	32622177
Gene end:	32710922

Corresponding Affymetrix probe sets:	Dr.11184.1.A1_at (Zebrafish Array) NM_200723_at (Zebrafish Genome Array with custom cdf files)

Cross references:	Ensembl peptide - ENSDARP00000012565 Ensembl peptide - ENSDARP00000130908 Ensembl peptide - ENSDARP00000153855 NCBI entrez gene - 393696 See in Manteia. RefSeq - NM_200723 RefSeq - XM_021468015 RefSeq Peptide - NP_957017 swissprot - Q6PC34 ZFIN ID - ZDB-GENE-040426-1683 Ensembl - ENSDARG00000018397

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name

Species

No match

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *	ENSDARG00000022763	91
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*	ENSDARG00000070688	90
ncaldb / Q6AXL4 / neurocalcin delta b	ENSDARG00000011334	86
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000044053	69
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*	ENSDARG00000023228	69
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*	ENSDARG00000070491	67
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*	ENSDARG00000054186	59
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*	ENSDARG00000055229	59
rcvrna / recoverin a / RCVRN* / P35243* / P34057* / recoverin*	ENSDARG00000052223	49
rcvrn2 / recoverin 2	ENSDARG00000019902	47
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*	ENSDARG00000111827	45
rcvrn3 / recoverin 3	ENSDARG00000009637	42
guca1b / guanylate cyclase activator 1B / Q8VBV8* / Q9UMX6* / Guanylyl cyclase-activating protein 2 *	ENSDARG00000013393	40
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*	ENSDARG00000034808	40
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*	ENSDARG00000017880	39
si:ch211-145b13.5 / KCNIP4* / Q6PHZ8* / Q6PIL6* / Kv channel interacting protein 4* / potassium voltage-gated channel interacting protein 4*	ENSDARG00000037256	38
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*	ENSDARG00000088100	38
kcnip2 / Kv channel interacting protein 2 / Q9JJ69* / Q9NS61* / potassium voltage-gated channel interacting protein 2*	ENSDARG00000075846	38
guca1a / guanylate cyclase activator 1A	ENSDARG00000010454	38
si:ch211-245j22.3	ENSDARG00000041379	37

Protein motifs (from Interpro)

Interpro ID	Name
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
cellular_component	GO:0005575	cellular_component	ND
molecular_function	GO:0005509	calcium ion binding	IEA

Pathways (from Reactome)

Pathway description

No match

Phenotype (from MGI, Zfin or HPO)

Phenotype

Definition

Genetic BG

No match

Interacting proteins (from Reactome)

Interactor ID

Name

Interaction type

No match

0 s.

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		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr