ENSDARG00000052223


Danio rerio

Features
Gene ID: ENSDARG00000052223
  
Biological name :rcvrna
  
Synonyms : rcvrna / recoverin a
  
Possible biological names infered from orthology : P34057 / P35243 / RCVRN / recoverin
  
Species: Danio rerio
  
Chr. number: 3
Strand: -1
Band:
Gene start: 50441444
Gene end: 50443607
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000068525
NCBI entrez gene - 570333     See in Manteia.
RefSeq - NM_001030248
RefSeq Peptide - NP_001025419
swissprot - Q4V8S2
ZFIN ID - ZDB-GENE-050913-106
Ensembl - ENSDARG00000052223
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RCVRNENSG00000109047Homo sapiens
 RcvrnENSMUSG00000020907Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rcvrnb / recoverin b / RCVRN* / P35243* / recoverin*ENSDARG0000011182773
rcvrn2 / recoverin 2ENSDARG0000001990263
rcvrn3 / recoverin 3ENSDARG0000000963756
hpca / hippocalcinENSDARG0000001839746
hpcal1 / hippocalcin-like 1 / P37235* / P62748* / Hippocalcin-like protein 1 *ENSDARG0000002276345
ncalda / neurocalcin delta a / NCALD* / Q91X97* / P61601* / neurocalcin delta*ENSDARG0000007068844
ncaldb / Q6AXL4 / neurocalcin delta bENSDARG0000001133443
vsnl1b / vsnl1a / visinin-like 1b / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000004405340
hpcal4 / hippocalcin like 4 / Q8BGZ1* / Q9UM19*ENSDARG0000007049140
vsnl1a / visinin-like 1a / VSNL1* / P62760* / P62761* / visinin like 1*ENSDARG0000002322840
ncs1b / neuronal calcium sensor 1b / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005418639
ncs1a / neuronal calcium sensor 1a / NCS1* / Q8BNY6* / P62166* / neuronal calcium sensor 1*ENSDARG0000005522939
guca1b / guanylate cyclase activator 1B / Q8VBV8* / Q9UMX6* / Guanylyl cyclase-activating protein 2 *ENSDARG0000001339330
kcnip1b / Kv channel interacting protein 1 b / KCNIP1* / Q9JJ57* / Q9NZI2* / Kv channel-interacting protein 1 * / potassium voltage-gated channel interacting protein 1*ENSDARG0000003480830
si:ch211-245j22.3ENSDARG0000004137929
kcnip3b / Kv channel interacting protein 3b, calsenilin / Q9Y2W7* / KCNIP3* / Q9QXT8* / Kv channel interacting protein 3, calsenilin* / potassium voltage-gated channel interacting protein 3*ENSDARG0000001788029
KCNIP4 / potassium voltage-gated channel interacting protein 4 / Q6PIL6*ENSDARG0000008810028
guca1d / guanylate cyclase activator 1d / GUCA1C* / O95843* / guanylate cyclase activator 1C*ENSDARG0000004462928
guca1a / guanylate cyclase activator 1AENSDARG0000001045427
guca1g / guanylate cyclase activator 1gENSDARG0000004573727


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0036368 cone photoresponse recovery IGI
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
Inactivation, recovery and regulation of the phototransduction cascade


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSDARG00000058803 grk1a / G protein-coupled receptor kinase 1 a / GRK1* / Q15835* / G protein-coupled receptor kinase 1*  / complex






 

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