Manteia - Molecule gene

ENSMUSG00000020907

Mus musculus

Features

Gene ID:	ENSMUSG00000020907

Biological name :	Rcvrn

Synonyms :	P34057 / Rcvrn / recoverin

Possible biological names infered from orthology :	P35243

Species:	Mus musculus

Chr. number:	11
Strand:	1
Band:	B3
Gene start:	67695326
Gene end:	67703333

Corresponding Affymetrix probe sets:	10377235 (MoGene1.0st) 1450215_at (Mouse Genome 430 2.0 Array)

Cross references:	Ensembl peptide - ENSMUSP00000021290 NCBI entrez gene - 19674 See in Manteia. MGI - MGI:97883 RefSeq - NM_009038 RefSeq Peptide - NP_033064 swissprot - P34057 swissprot - Q2TB46 Ensembl - ENSMUSG00000020907

See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed

Ortholog prediction (from Ensembl)

Ortholog name	ID	Species
rcvrna	ENSDARG00000052223	Danio rerio
rcvrnb	ENSDARG00000111827	Danio rerio
RCVRN	ENSG00000109047	Homo sapiens

Paralog prediction (from Ensembl)

Paralog name	ID	Similarity(%)
Hpca / P84075 / Neuron-specific calcium-binding protein hippocalcin / P84074* / hippocalcin*	ENSMUSG00000028785	49
Ncald / Q91X97 / Neurocalcin-delta / P61601*	ENSMUSG00000051359	49
Hpcal1 / P62748 / Hippocalcin-like protein 1 / P37235* / hippocalcin like 1*	ENSMUSG00000071379	49
Hpcal4 / Q8BGZ1 / hippocalcin-like 4 / Q9UM19*	ENSMUSG00000046093	43
Vsnl1 / P62761 / visinin-like 1 / P62760*	ENSMUSG00000054459	43
Ncs1 / Q8BNY6 / Neuronal calcium sensor 1 / P62166*	ENSMUSG00000062661	42
Kcnip2 / Q9JJ69 / Kv channel-interacting protein 2 / Q9NS61* / potassium voltage-gated channel interacting protein 2*	ENSMUSG00000025221	34
Kcnip4 / Q6PHZ8 / Kv channel interacting protein 4 / Q6PIL6* / potassium voltage-gated channel interacting protein 4*	ENSMUSG00000029088	33
Kcnip3 / Q9QXT8 / Kv channel interacting protein 3, calsenilin / Q9Y2W7* / potassium voltage-gated channel interacting protein 3*	ENSMUSG00000079056	33
Guca1b / Q8VBV8 / Guanylyl cyclase-activating protein 2 / Q9UMX6* / guanylate cyclase activator 1B*	ENSMUSG00000023979	32
Kcnip1 / Q9JJ57 / Kv channel-interacting protein 1 / Q9NZI2* / potassium voltage-gated channel interacting protein 1*	ENSMUSG00000053519	32
Guca1a / P43081 / Guanylyl cyclase-activating protein 1 / P43080* / guanylate cyclase activator 1A*	ENSMUSG00000023982	32

Protein motifs (from Interpro)

Interpro ID	Name
IPR002048	EF-hand domain
IPR011992	EF-hand domain pair
IPR018247	EF-Hand 1, calcium-binding site

Gene Ontology (GO)

Type	GO ID	Term	Ev.Code
biological_process	GO:0007601	visual perception	IMP
biological_process	GO:0007602	phototransduction	IMP
biological_process	GO:0050896	response to stimulus	IEA
biological_process	GO:0051924	regulation of calcium ion transport	IMP
cellular_component	GO:0030425	dendrite	IEA
molecular_function	GO:0005509	calcium ion binding	IMP
molecular_function	GO:0046872	metal ion binding	IEA

Pathways (from Reactome)

Pathway description

Inactivation, recovery and regulation of the phototransduction cascade

Phenotype (from MGI, Zfin or HPO)

ID	Phenotype	Definition	Genetic BG
MP:0005253	abnormal eye physiology	"anomalous function and/or activity of the ocular system or any of its parts" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]	Show Allelic Composition: Spry2^tm1Ayos/Spry2^tm1Ayos Genetic Background: B6.Cg-Spry2^tm1Ayos
MP:0005551	abnormal eye electrophysiology	"abnormal function of the eye as determined through electrophysiological recordings from single cells or summary recordings from multiple cells (e.g. electroretinogram)" [NMF:Stephanie Pretel, Neuroscience Mutagenesis Facility Curator]	Show Allelic Composition: Spry2^tm1Ayos/Spry2^tm1Ayos Genetic Background: B6.Cg-Spry2^tm1Ayos Allelic Composition: Rcvrn^tm1Clma/Rcvrn^tm1Clma Genetic Background: involves: 129S1/Sv Allelic Composition: Guca1a/Guca1b^tm1Jnc/Guca1a/Guca1b^tm1Jnc,Rcvrn^tm1Clma/Rcvrn^tm1Clma Genetic Background: involves: 129S1/Sv

Interacting proteins (from Reactome)

Interactor ID	Name	Interaction type
ENSMUSG00000031450	Grk1 / G protein-coupled receptor kinase 1 / Q15835*	/ complex

0 s.

External programs and data are copyrighted by and are the property of their respective authors. The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation
		© Olivier Tassy / Olivier Pourquie 2007-2024 contact: otassy@igbmc.fr