ENSMUSG00000046093


Mus musculus

Features
Gene ID: ENSMUSG00000046093
  
Biological name :Hpcal4
  
Synonyms : hippocalcin-like 4 / Hpcal4 / Q8BGZ1
  
Possible biological names infered from orthology : Q9UM19
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 123183227
Gene end: 123194701
  
Corresponding Affymetrix probe sets: 10507826 (MoGene1.0st)   1433987_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000101853
Ensembl peptide - ENSMUSP00000120066
Ensembl peptide - ENSMUSP00000122104
Ensembl peptide - ENSMUSP00000051487
NCBI entrez gene - 170638     See in Manteia.
MGI - MGI:2157521
RefSeq - NM_174998
RefSeq Peptide - NP_778163
swissprot - Q8BGZ1
swissprot - B2RRY8
swissprot - F2Z3Z1
swissprot - F2Z450
Ensembl - ENSMUSG00000046093
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hpcal4ENSDARG00000070491Danio rerio
 HPCAL4ENSGALG00000003829Gallus gallus
 HPCAL4ENSG00000116983Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Vsnl1 / P62761 / visinin-like 1 / P62760*ENSMUSG0000005445990
Hpca / P84075 / Neuron-specific calcium-binding protein hippocalcin / P84074* / hippocalcin*ENSMUSG0000002878568
Hpcal1 / P62748 / Hippocalcin-like protein 1 / P37235* / hippocalcin like 1*ENSMUSG0000007137966
Ncald / Q91X97 / Neurocalcin-delta / P61601*ENSMUSG0000005135965
Ncs1 / Q8BNY6 / Neuronal calcium sensor 1 / P62166*ENSMUSG0000006266155
Rcvrn / P34057 / recoverin / P35243*ENSMUSG0000002090746
Kcnip1 / Q9JJ57 / Kv channel-interacting protein 1 / Q9NZI2* / potassium voltage-gated channel interacting protein 1*ENSMUSG0000005351941
Kcnip2 / Q9JJ69 / Kv channel-interacting protein 2 / Q9NS61* / potassium voltage-gated channel interacting protein 2*ENSMUSG0000002522141
Guca1b / Q8VBV8 / Guanylyl cyclase-activating protein 2 / Q9UMX6* / guanylate cyclase activator 1B*ENSMUSG0000002397940
Kcnip4 / Q6PHZ8 / Kv channel interacting protein 4 / Q6PIL6* / potassium voltage-gated channel interacting protein 4*ENSMUSG0000002908838
Kcnip3 / Q9QXT8 / Kv channel interacting protein 3, calsenilin / Q9Y2W7* / potassium voltage-gated channel interacting protein 3*ENSMUSG0000007905637
Guca1a / P43081 / Guanylyl cyclase-activating protein 1 / P43080* / guanylate cyclase activator 1A*ENSMUSG0000002398235


Protein motifs (from Interpro)
Interpro ID Name
 IPR002048  EF-hand domain
 IPR011992  EF-hand domain pair
 IPR018247  EF-Hand 1, calcium-binding site
 IPR029533  Visinin-like protein 1
 IPR029534  Visinin-like protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0065009 regulation of molecular function IEA
 cellular_componentGO:0005622 intracellular ISO
 molecular_functionGO:0005246 calcium channel regulator activity IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0008022 protein C-terminus binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002590 increased mean corpuscular volume "greater than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Fgfr1tm1.1(KOMP)Vlcg/Fgfr1+
Genetic Background: C57BL/6N-Fgfr1tm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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