ENSG00000108306


Homo sapiens

Features
Gene ID: ENSG00000108306
  
Biological name :FBXL20
  
Synonyms : F-box and leucine rich repeat protein 20 / FBXL20 / Q96IG2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q12
Gene start: 39252644
Gene end: 39402523
  
Corresponding Affymetrix probe sets: 226842_at (Human Genome U133 Plus 2.0 Array)   232412_at (Human Genome U133 Plus 2.0 Array)   235089_at (Human Genome U133 Plus 2.0 Array)   239223_s_at (Human Genome U133 Plus 2.0 Array)   239224_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000495330
Ensembl peptide - ENSP00000462878
Ensembl peptide - ENSP00000463132
Ensembl peptide - ENSP00000264658
Ensembl peptide - ENSP00000377832
Ensembl peptide - ENSP00000462271
NCBI entrez gene - 84961     See in Manteia.
OMIM - 609086
RefSeq - XM_005257747
RefSeq - NM_001184906
RefSeq - NM_032875
RefSeq - XM_005257746
RefSeq Peptide - NP_001171835
RefSeq Peptide - NP_116264
swissprot - J3QKL3
swissprot - Q96IG2
swissprot - J3KTA1
Ensembl - ENSG00000108306
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fbxl20ENSDARG00000075567Danio rerio
 FBXL20ENSGALG00000001682Gallus gallus
 Fbxl20ENSMUSG00000020883Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FBXL2 / Q9UKC9 / F-box and leucine rich repeat protein 2ENSG0000015355876
FBXL7 / Q9UJT9 / F-box and leucine rich repeat protein 7ENSG0000018358028
FBXL13 / Q8NEE6 / F-box and leucine rich repeat protein 13ENSG0000016104026
FBXL17 / Q9UF56 / F-box and leucine rich repeat protein 17ENSG0000014574324
FBXL16 / Q8N461 / F-box and leucine rich repeat protein 16ENSG0000012758521
FBXL4 / Q9UKA2 / F-box and leucine rich repeat protein 4ENSG0000011223421
FBXL14 / Q8N1E6 / F-box and leucine rich repeat protein 14ENSG0000017182321
FBXL15 / Q9H469 / F-box and leucine rich repeat protein 15ENSG0000010787216
LRRC29 / Q8WV35 / leucine rich repeat containing 29ENSG000001251229


Protein motifs (from Interpro)
Interpro ID Name
 IPR001611  Leucine-rich repeat
 IPR001810  F-box domain
 IPR006553  Leucine-rich repeat, cysteine-containing subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination TAS
 biological_processGO:0001662 behavioral fear response IEA
 biological_processGO:0043687 post-translational protein modification TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol TAS
 molecular_functionGO:0004842 ubiquitin-protein transferase activity TAS
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
Neddylation
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr