ENSG00000108468


Homo sapiens

Features
Gene ID: ENSG00000108468
  
Biological name :CBX1
  
Synonyms : CBX1 / chromobox 1 / P83916
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q21.32
Gene start: 48070052
Gene end: 48101521
  
Corresponding Affymetrix probe sets: 201518_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000385413
Ensembl peptide - ENSP00000465985
Ensembl peptide - ENSP00000462242
Ensembl peptide - ENSP00000393179
Ensembl peptide - ENSP00000225603
Ensembl peptide - ENSP00000377060
NCBI entrez gene - 10951     See in Manteia.
OMIM - 604511
RefSeq - NM_006807
RefSeq - NM_001127228
RefSeq Peptide - NP_001120700
RefSeq Peptide - NP_006798
swissprot - C9JWS9
swissprot - Q6IBN6
swissprot - B5MD17
swissprot - J3KS05
swissprot - K7ELA4
swissprot - P83916
Ensembl - ENSG00000108468
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbx1aENSDARG00000004189Danio rerio
 cbx1bENSDARG00000054442Danio rerio
 CBX1ENSGALG00000033926Gallus gallus
 Cbx1ENSMUSG00000018666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CBX3 / Q13185 / chromobox 3ENSG0000012256571
CBX5 / P45973 / chromobox 5ENSG0000009491664


Protein motifs (from Interpro)
Interpro ID Name
 IPR000953  Chromo/chromo shadow domain
 IPR008251  Chromo shadow domain
 IPR016197  Chromo-like domain superfamily
 IPR017984  Chromo domain subgroup
 IPR023779  Chromo domain, conserved site
 IPR023780  Chromo domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0000775 chromosome, centromeric region IDA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IDA
 cellular_componentGO:0000785 chromatin IDA
 cellular_componentGO:0001939 female pronucleus IEA
 cellular_componentGO:0001940 male pronucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm TAS
 cellular_componentGO:0005720 nuclear heterochromatin TAS
 cellular_componentGO:0005721 pericentric heterochromatin IEA
 cellular_componentGO:0005819 spindle IDA
 cellular_componentGO:0010369 chromocenter IEA
 molecular_functionGO:0003682 chromatin binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:1990226 histone methyltransferase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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