ENSGALG00000033926


Gallus gallus

Features
Gene ID: ENSGALG00000033926
  
Biological name :CBX1
  
Synonyms : CBX1 / chromobox 1
  
Possible biological names infered from orthology : Chromobox protein homolog 1 / P83916 / P83917
  
Species: Gallus gallus
  
Chr. number: 27
Strand: 1
Band:
Gene start: 4168580
Gene end: 4176543
  
Corresponding Affymetrix probe sets: Gga.50.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000049721
NCBI entrez gene - 374237     See in Manteia.
RefSeq - XM_015299477
RefSeq - NM_204332
RefSeq - XM_015299478
RefSeq Peptide - NP_989663
swissprot - O93480
Ensembl - ENSGALG00000033926
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cbx1aENSDARG00000004189Danio rerio
 cbx1bENSDARG00000054442Danio rerio
 CBX1ENSG00000108468Homo sapiens
 Cbx1ENSMUSG00000018666Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
CBX3 / Q13185* / chromobox 3* / chromobox protein homolog 3 *ENSGALG0000001103870
CBX5 / chromobox 5 / P45973* / Q61686* / Mus musculus chromobox 5 (Cbx5), transcript variant 4, mRNA.*ENSGALG0000003685663


Protein motifs (from Interpro)
Interpro ID Name
 IPR000953  Chromo/chromo shadow domain
 IPR008251  Chromo shadow domain
 IPR016197  Chromo-like domain superfamily
 IPR017984  Chromo domain subgroup
 IPR023779  Chromo domain, conserved site
 IPR023780  Chromo domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IEA
 cellular_componentGO:0000775 chromosome, centromeric region IEA
 cellular_componentGO:0000784 nuclear chromosome, telomeric region IEA
 cellular_componentGO:0000785 chromatin IEA
 cellular_componentGO:0001939 female pronucleus IEA
 cellular_componentGO:0001940 male pronucleus IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005721 pericentric heterochromatin IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0010369 chromocenter IEA
 molecular_functionGO:0003779 actin binding IPI
 molecular_functionGO:0019899 enzyme binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:1990226 histone methyltransferase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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