ENSG00000108813


Homo sapiens

Features
Gene ID: ENSG00000108813
  
Biological name :DLX4
  
Synonyms : distal-less homeobox 4 / DLX4 / Q92988
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q21.33
Gene start: 49968970
Gene end: 49974959
  
Corresponding Affymetrix probe sets: 208216_at (Human Genome U133 Plus 2.0 Array)   210259_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000240306
Ensembl peptide - ENSP00000410622
Ensembl peptide - ENSP00000480366
NCBI entrez gene - 1748     See in Manteia.
OMIM - 601911
RefSeq - XM_017024291
RefSeq - NM_001934
RefSeq - NM_138281
RefSeq Peptide - NP_612138
RefSeq Peptide - NP_001925
swissprot - Q92988
Ensembl - ENSG00000108813
  
Related genetic diseases (OMIM): 616788 - ?Orofacial cleft 15, 616788

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dlx4aENSDARG00000011956Danio rerio
 dlx4bENSDARG00000071560Danio rerio
 DLX4ENSGALG00000045023Gallus gallus
 Dlx4ENSMUSG00000020871Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DLX6 / P56179 / distal-less homeobox 6ENSG0000000637743
DLX1 / P56177 / distal-less homeobox 1ENSG0000014435539
DLX5 / P56178 / distal-less homeobox 5ENSG0000010588036
DLX2 / Q07687 / distal-less homeobox 2ENSG0000011584435
DLX3 / O60479 / distal-less homeobox 3ENSG0000006419533
MSX1 / P28360 / msh homeobox 1ENSG0000016313225
MSX2 / P35548 / msh homeobox 2ENSG0000012014923


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006355 regulation of transcription, DNA-templated NAS
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus NAS
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000316 Hypertelorism 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000411 Protruding ears 
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 HP:0000414 Bulbous nose 
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0000653 Sparse eyelashes "Decreased density/number of eyelashes." [pmid:19125427]
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0007651 Mildly everted lower eyelids 
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 HP:0009890 High frontal hairline "An abnormally high hairline (border between forehead and scalp hair)." [HPO:curators]
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 HP:0010294 Palate fistula "A fistula which connects the oral cavity and the pharyngeal area via the aspects of the soft palate." [HPO:curators]
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 HP:0011800 Midface retrusion "Posterior positions and/or vertical shortening of the infraorbital and perialar regions, or increased concavity of the face and/or reduced nasolabial angle." [DDD:jclayton-smith]
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 HP:0012905 Euryblepharon "Euryblepharon is a congenital eyelid anomaly characterized by horizontal enlargement of the palpebral fissure. The eyelid is shortened vertically compared with the horizontal dimension, with associated lateral canthal malpositioning and lateral ectropion abnormally wide lid opening." [HPO:probinson, pmid:15249382, pmid:15530943, pmid:24719364]
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 HP:0045075 Sparse eyebrow "Decreased density/number of eyebrow hairs." [HPO:skoehler]
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 HP:0100271 Hyponasal speech "Hyponasal speech is when there is an abnormally reduced nasal airflow during speech often in a setting of nasal obstruction or congestion." [HPO:sdoelken]
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 HP:0100336 Bilateral cleft lip 
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 HP:0100337 Bilateral cleft palate 
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 HP:0200153 Agenesis of lateral incisor 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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