ENSDARG00000011956


Danio rerio

Features
Gene ID: ENSDARG00000011956
  
Biological name :dlx4a
  
Synonyms : distal-less homeobox 4a / dlx4a / Q98879
  
Possible biological names infered from orthology : distal-less homeobox 4 / DLX4 / Homeobox protein DLX-4 / P70436 / Q92988
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 34670076
Gene end: 34681421
  
Corresponding Affymetrix probe sets: Dr.158.1.S1_at (Zebrafish Array)   NM_131300_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000122639
NCBI entrez gene - 30561     See in Manteia.
RefSeq - NM_131300
RefSeq Peptide - NP_571375
swissprot - Q98879
ZFIN ID - ZDB-GENE-980526-73
Ensembl - ENSDARG00000011956
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DLX4ENSGALG00000045023Gallus gallus
 DLX4ENSG00000108813Homo sapiens
 Dlx4ENSMUSG00000020871Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dlx4b / Q98878 / distal-less homeobox 4b / DLX4* / P70436* / Q92988* / distal-less homeobox 4* / Homeobox protein DLX-4 *ENSDARG0000007156068
dlx6a / Q98877 / distal-less homeobox 6a / DLX6* / P56179* / P70397* / distal-less homeobox 6* / Homeobox protein DLX-6 *ENSDARG0000004229155
dlx1a / Q98875 / distal-less homeobox 1a / DLX1* / P56177* / distal-less homeobox 1*ENSDARG0000001312550
dlx5a / distal-less homeobox 5a / DLX5* / P70396* / P56178* / distal-less homeobox 5* / Homeobox protein DLX-5 *ENSDARG0000004229637
dlx2b / Q98876 / distal-less homeobox 2bENSDARG0000001717436
dlx3b / distal-less homeobox 3b / DLX3* / Q64205* / O60479* / distal-less homeobox 3* / Homeobox protein DLX-3 *ENSDARG0000001462634
dlx2a / distal-less homeobox 2a / DLX2* / Q07687* / distal-less homeobox 2*ENSDARG0000007996434
msx1a / muscle segment homeobox 1a / MSX1* / P28360* / msh homeobox 1*ENSDARG0000011611824
msx1b / Q03356 / muscle segment homeobox 1b / Msx3* / P70354* / Mus musculus msh homeobox 3 (Msx3), transcript variant 2, mRNA.*ENSDARG0000000888623
msx3 / muscle segment homeobox 3 / P70354* / Mus musculus msh homeobox 3 (Msx3), transcript variant 2, mRNA.*ENSDARG0000001567423
msx2b / Q01704 / muscle segment homeobox 2b / MSX2* / P35548* / msh homeobox 2*ENSDARG0000010102322
msx2a / muscle segment homeobox 2aENSDARG0000010465120


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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