ENSDARG00000042291


Danio rerio

Features
Gene ID: ENSDARG00000042291
  
Biological name :dlx6a
  
Synonyms : distal-less homeobox 6a / dlx6a / Q98877
  
Possible biological names infered from orthology : distal-less homeobox 6 / DLX6 / Homeobox protein DLX-6 / P56179 / P70397
  
Species: Danio rerio
  
Chr. number: 19
Strand: 1
Band:
Gene start: 41419519
Gene end: 41467041
  
Corresponding Affymetrix probe sets: Dr.145.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000093553
Ensembl peptide - ENSDARP00000123729
Ensembl peptide - ENSDARP00000124583
NCBI entrez gene - 30586     See in Manteia.
swissprot - F8W2W6
swissprot - F8W5B0
swissprot - Q98877
ZFIN ID - ZDB-GENE-980526-448
Ensembl - ENSDARG00000042291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 DLX6ENSGALG00000023195Gallus gallus
 DLX6ENSG00000006377Homo sapiens
 Dlx6ENSMUSG00000029754Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
dlx1a / Q98875 / distal-less homeobox 1a / DLX1* / P56177* / distal-less homeobox 1*ENSDARG0000001312560
dlx4a / Q98879 / distal-less homeobox 4a / DLX4* / P70436* / Q92988* / distal-less homeobox 4* / Homeobox protein DLX-4 *ENSDARG0000001195655
dlx4b / Q98878 / distal-less homeobox 4b / DLX4* / P70436* / Q92988* / distal-less homeobox 4* / Homeobox protein DLX-4 *ENSDARG0000007156053
dlx2a / distal-less homeobox 2a / DLX2* / Q07687* / distal-less homeobox 2*ENSDARG0000007996442
dlx5a / distal-less homeobox 5a / DLX5* / P70396* / P56178* / distal-less homeobox 5* / Homeobox protein DLX-5 *ENSDARG0000004229638
dlx2b / Q98876 / distal-less homeobox 2bENSDARG0000001717438
dlx3b / distal-less homeobox 3b / DLX3* / Q64205* / O60479* / distal-less homeobox 3* / Homeobox protein DLX-3 *ENSDARG0000001462637
msx1a / muscle segment homeobox 1a / MSX1* / P28360* / msh homeobox 1*ENSDARG0000011611823
msx3 / muscle segment homeobox 3 / P70354* / Mus musculus msh homeobox 3 (Msx3), transcript variant 2, mRNA.*ENSDARG0000001567422
msx2b / Q01704 / muscle segment homeobox 2b / MSX2* / P35548* / msh homeobox 2*ENSDARG0000010102322
msx1b / Q03356 / muscle segment homeobox 1b / Msx3* / P70354* / Mus musculus msh homeobox 3 (Msx3), transcript variant 2, mRNA.*ENSDARG0000000888621
msx2a / muscle segment homeobox 2aENSDARG0000010465120


Protein motifs (from Interpro)
Interpro ID Name
 IPR000047  Helix-turn-helix motif
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site
 IPR020479  Homeobox domain, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0033339 pectoral fin development IGI
 biological_processGO:0035141 medial fin morphogenesis IGI
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0043565 sequence-specific DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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