ENSG00000109861


Homo sapiens

Features
Gene ID: ENSG00000109861
  
Biological name :CTSC
  
Synonyms : cathepsin C / CTSC / P53634
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: q14.2
Gene start: 88293592
Gene end: 88337787
  
Corresponding Affymetrix probe sets: 201487_at (Human Genome U133 Plus 2.0 Array)   225646_at (Human Genome U133 Plus 2.0 Array)   225647_s_at (Human Genome U133 Plus 2.0 Array)   231234_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000432541
Ensembl peptide - ENSP00000227266
Ensembl peptide - ENSP00000433229
Ensembl peptide - ENSP00000433539
Ensembl peptide - ENSP00000432556
NCBI entrez gene - 1075     See in Manteia.
OMIM - 602365
RefSeq - NM_001114173
RefSeq - NM_148170
RefSeq - NM_001814
RefSeq Peptide - NP_001107645
RefSeq Peptide - NP_680475
RefSeq Peptide - NP_001805
swissprot - P53634
swissprot - H0YCY8
swissprot - H0YDA2
Ensembl - ENSG00000109861
  
Related genetic diseases (OMIM): 170650 - Periodontitis 1, juvenile, 170650
  245000 - Papillon-Lefevre syndrome, 245000
  245010 - Haim-Munk syndrome, 245010
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctscENSDARG00000101334Danio rerio
 CTSCENSGALG00000017239Gallus gallus
 CtscENSMUSG00000030560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9GZM7 / TINAGL1 / tubulointerstitial nephritis antigen like 1ENSG0000014291024
TINAG / Q9UJW2 / tubulointerstitial nephritis antigenENSG0000013725122
CTSB / P07858 / cathepsin BENSG0000016473321
CTSZ / Q9UBR2 / cathepsin ZENSG0000010116020
CTSO / P43234 / cathepsin OENSG0000025604318


Protein motifs (from Interpro)
Interpro ID Name
 IPR000169  Cysteine peptidase, cysteine active site
 IPR000668  Peptidase C1A, papain C-terminal
 IPR013128  Peptidase C1A
 IPR014882  Cathepsin C exclusion
 IPR025660  Cysteine peptidase, histidine active site
 IPR025661  Cysteine peptidase, asparagine active site
 IPR036496  Cathepsin C, exclusion domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001913 T cell mediated cytotoxicity IEA
 biological_processGO:0006508 proteolysis IDA
 biological_processGO:0006888 ER to Golgi vesicle-mediated transport TAS
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0006955 immune response TAS
 biological_processGO:0007568 aging IEA
 biological_processGO:0010033 response to organic substance IEA
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0048208 COPII vesicle coating TAS
 biological_processGO:0051603 proteolysis involved in cellular protein catabolic process IBA
 biological_processGO:1903052 positive regulation of proteolysis involved in cellular protein catabolic process ISS
 biological_processGO:2001235 positive regulation of apoptotic signaling pathway IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space HDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005764 lysosome ISS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005788 endoplasmic reticulum lumen TAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0030134 COPII-coated ER to Golgi transport vesicle TAS
 cellular_componentGO:0033116 endoplasmic reticulum-Golgi intermediate compartment membrane TAS
 cellular_componentGO:0035578 azurophil granule lumen TAS
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0004197 cysteine-type endopeptidase activity IBA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IDA
 molecular_functionGO:0016505 peptidase activator activity involved in apoptotic process IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0019902 phosphatase binding ISS
 molecular_functionGO:0031404 chloride ion binding IEA
 molecular_functionGO:0042802 identical protein binding IEA
 molecular_functionGO:0043621 protein self-association IEA
 molecular_functionGO:0051087 chaperone binding ISS


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
MHC class II antigen presentation
Cargo concentration in the ER
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000166 Severe, early-onset periodontitis 
Show

 HP:0000230 Gingivitis 
Show

 HP:0000951 Abnormality of the skin "An abnormality of the `skin` (FMA:7163)." [HPO:probinson]
Show

 HP:0000972 Palmoplantar hyperkeratosis "`Hyperkeratosis` (HP:0000962) affecting the palm of the hand and the sole of the foot." [HPO:probinson]
Show

 HP:0000982 Palmoplantar keratoderma 
Show

 HP:0000998 Hypertrichosis "Hypertrichosis is increased hair growth that is abnormal in quantity or location." [HPO:curators]
Show

 HP:0001053 Hypopigmented skin patches 
Show

 HP:0001073 Cigarette-paper scars 
Show

 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
Show

 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
Show

 HP:0001425 Heterogeneous 
Show

 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
Show

 HP:0001805 Thickened nails 
Show

 HP:0002205 Recurrent respiratory infections 
Show

 HP:0002230 Generalized hirsutism "Abnormally increased hair growth over much of the entire body." [HPO:curators]
Show

 HP:0002231 Sparse body hair "Sparseness of the body hair." [HPO:probinson]
Show

 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
Show

 HP:0002797 Osteolysis 
Show

 HP:0002860 Squamous cell carcinoma 
Show

 HP:0002861 Malignant melanoma "A malignant skin tumor of originating from melanocytes, pigment cells normally present in the epidermis and sometimes in the dermis." [HPO:curators]
Show

 HP:0005406 Recurrent bacterial skin infections 
Show

 HP:0006224 Tapered, pointed distal phalanges 
Show

 HP:0006308 Atrophy of alveolar ridges 
Show

 HP:0006323 Premature deciduous tooth loss 
Show

 HP:0006480 Premature loss of teeth 
Show

 HP:0006960 Choroid plexus calcification "Calcification occurring within the choroid plexus." [HPO:curators]
Show

 HP:0007545 Congenital palmoplantar keratosis 
Show

 HP:0008404 Nail dystrophy, variable 
Show

 HP:0009771 Osteolytic defects of the phalanges of the hand "Dissolution or degeneration of bone tissue of the phalanges of the hand." [HPO:curators]
Show

 HP:0009804 Reduced number of teeth 
Show

 HP:0011132 Chronic furunculosis "A furuncle (boil) is a skin infection involving an entire hair follicle and nearby skin tissue. Chronic furunculosis refers to recurrent episodes of furuncles, often caused by recurrent staphylococcus infection." [HPO:probinson]
Show

 HP:0030816 Gingival recession "The loss of gum tissue. The result is that gum tissue is recessed and its position on the tooth is lowered, exposing the roots of the teeth." []
Show

 HP:0100523 Liver abscess "The presence of an `abscess` (MPATH:608) of the `liver` (FMA:7197)." [HPO:probinson]
Show

 HP:0100838 Recurrent cutaneous abscess formation "An increased susceptibility to cutaneous abscess formation, as manifested by a medical history of recurrent cutaneous abscesses." [HPO:probinson]
Show

 HP:0200039 skin pustule "A small elevation of the skin containing cloudy or purulent material usually consisting of necrotic inflammatory cells." [HPO:SKOEHLER]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000074695 LMAN1 / P49257 / lectin, mannose binding 1  / complex / reaction






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr