ENSDARG00000101334


Danio rerio

Features
Gene ID: ENSDARG00000101334
  
Biological name :ctsc
  
Synonyms : cathepsin C / ctsc
  
Possible biological names infered from orthology : P53634 / P97821
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 43604032
Gene end: 43625549
  
Corresponding Affymetrix probe sets: Dr.4782.1.S1_at (Zebrafish Array)   NM_214722_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000135284
NCBI entrez gene - 368704     See in Manteia.
RefSeq - NM_214722
RefSeq Peptide - NP_999887
swissprot - A0A0R4IBK4
swissprot - A0A0R4IK18
ZFIN ID - ZDB-GENE-030619-9
Ensembl - ENSDARG00000101334
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CTSCENSGALG00000017239Gallus gallus
 CTSCENSG00000109861Homo sapiens
 CtscENSMUSG00000030560Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tinagl1 / tubulointerstitial nephritis antigen-like 1 / Q99JR5* / Q9GZM7* / Tubulointerstitial nephritis antigen-like *ENSDARG0000006123122
ctsbb / cathepsin Bb / CTSB* / P07858* / P10605* / cathepsin B*ENSDARG0000010105122
ctsba / cathepsin Ba / CTSB* / P07858* / P10605* / cathepsin B*ENSDARG0000005512021
CABZ01050249.1ENSDARG0000009937618
ctsz / cathepsin Z / Q9UBR2* / Q9WUU7*ENSDARG0000004308118
ctso / cathepsin O / P43234* / Q8BM88*ENSDARG0000005285517


Protein motifs (from Interpro)
Interpro ID Name
 IPR000668  Peptidase C1A, papain C-terminal
 IPR013128  Peptidase C1A
 IPR014882  Cathepsin C exclusion


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
COPII-mediated vesicle transport
MHC class II antigen presentation
Cargo concentration in the ER
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr