ENSG00000117394


Homo sapiens

Features
Gene ID: ENSG00000117394
  
Biological name :SLC2A1
  
Synonyms : P11166 / SLC2A1 / solute carrier family 2 member 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p34.2
Gene start: 42925375
Gene end: 42959176
  
Corresponding Affymetrix probe sets: 201249_at (Human Genome U133 Plus 2.0 Array)   201250_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000361578
Ensembl peptide - ENSP00000491942
Ensembl peptide - ENSP00000487213
Ensembl peptide - ENSP00000486694
Ensembl peptide - ENSP00000416293
NCBI entrez gene - 6513     See in Manteia.
OMIM - 138140
RefSeq - NM_006516
RefSeq Peptide - NP_006507
swissprot - A0A0D9SG74
swissprot - A6NL68
swissprot - P11166
swissprot - A0A0D9SFK9
swissprot - A0A1W2PQ59
Ensembl - ENSG00000117394
  
Related genetic diseases (OMIM): 601042 - Dystonia 9, 601042
  606777 - GLUT1 deficiency syndrome 1, infantile onset, severe, 606777
  608885 - Stomatin-deficient cryohydrocytosis with neurologic defects, 608885
  612126 - GLUT1 deficiency syndrome 2, childhood onset, 612126
  614847 - {Epilepsy, idiopathic generalized, susceptibility to, 12}, 614847
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc2a1aENSDARG00000001437Danio rerio
 slc2a1bENSDARG00000007412Danio rerio
 SLC2A1ENSGALG00000004889Gallus gallus
 P17809ENSMUSG00000028645Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P14672 / SLC2A4 / solute carrier family 2 member 4ENSG0000018185666
P11169 / SLC2A3 / solute carrier family 2 member 3ENSG0000005980464
Q8TDB8 / SLC2A14 / solute carrier family 2 member 14ENSG0000017326262
P11168 / SLC2A2 / solute carrier family 2 member 2ENSG0000016358156
P22732 / SLC2A5 / solute carrier family 2 member 5ENSG0000014258341
Q6PXP3 / SLC2A7 / solute carrier family 2 member 7ENSG0000019724139
Q9NRM0 / SLC2A9 / solute carrier family 2 member 9ENSG0000010966737
Q9BYW1 / SLC2A11 / solute carrier family 2 member 11ENSG0000013346031


Protein motifs (from Interpro)
Interpro ID Name
 IPR002439  Glucose transporter, type 1 (GLUT1)
 IPR003663  Sugar/inositol transporter
 IPR005828  Major facilitator, sugar transporter-like
 IPR005829  Sugar transporter, conserved site
 IPR020846  Major facilitator superfamily domain
 IPR036259  MFS transporter superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005989 lactose biosynthetic process TAS
 biological_processGO:0006970 response to osmotic stress IEA
 biological_processGO:0007565 female pregnancy IEA
 biological_processGO:0008643 carbohydrate transport IEA
 biological_processGO:0010827 regulation of glucose transmembrane transport TAS
 biological_processGO:0019852 L-ascorbic acid metabolic process TAS
 biological_processGO:0021987 cerebral cortex development IEA
 biological_processGO:0032868 response to insulin IEA
 biological_processGO:0042149 cellular response to glucose starvation IEA
 biological_processGO:0042908 xenobiotic transport IEA
 biological_processGO:0050796 regulation of insulin secretion TAS
 biological_processGO:0055085 transmembrane transport IEA
 biological_processGO:0065003 protein-containing complex assembly IDA
 biological_processGO:0070837 dehydroascorbic acid transport IEA
 biological_processGO:0071260 cellular response to mechanical stimulus IEA
 biological_processGO:0071474 cellular hyperosmotic response IEA
 biological_processGO:1904016 response to Thyroglobulin triiodothyronine IEA
 biological_processGO:1904659 glucose transmembrane transport IEA
 cellular_componentGO:0000139 Golgi membrane TAS
 cellular_componentGO:0001939 female pronucleus IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0005887 integral component of plasma membrane IDA
 cellular_componentGO:0005901 caveola IEA
 cellular_componentGO:0005911 cell-cell junction IEA
 cellular_componentGO:0014704 intercalated disc IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IEA
 cellular_componentGO:0016324 apical plasma membrane IEA
 cellular_componentGO:0030018 Z disc IEA
 cellular_componentGO:0030496 midbody IDA
 cellular_componentGO:0030864 cortical actin cytoskeleton IDA
 cellular_componentGO:0031982 vesicle IEA
 cellular_componentGO:0042383 sarcolemma IEA
 cellular_componentGO:0042470 melanosome IEA
 cellular_componentGO:0045121 membrane raft IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0072562 blood microparticle HDA
 molecular_functionGO:0005215 transporter activity IEA
 molecular_functionGO:0005355 glucose transmembrane transporter activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0019900 kinase binding IEA
 molecular_functionGO:0022857 transmembrane transporter activity IEA
 molecular_functionGO:0033300 dehydroascorbic acid transmembrane transporter activity EXP
 molecular_functionGO:0042802 identical protein binding IPI
 molecular_functionGO:0042910 xenobiotic transmembrane transporter activity IEA
 molecular_functionGO:0043621 protein self-association IDA
 molecular_functionGO:0055056 D-glucose transmembrane transporter activity IMP


Pathways (from Reactome)
Pathway description
Cellular hexose transport
Vitamin C (ascorbate) metabolism
Regulation of insulin secretion
Defective SLC2A1 causes GLUT1 deficiency syndrome 1 (GLUT1DS1)
Lactose synthesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000253 Microcephaly, progressive "Progressive microcephaly is diagnosed when the head circumference falls progressively behind age- and gender-dependent norms." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000518 Cataract "A cataract is an opacity or clouding that develops in the crystalline `lens` (FMA:58241) of the eye or in its `capsule` (FMA:58881)." [HPO:probinson]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0000718 Aggressive behavior "Aggressive behavior can denote verbal aggression, physical aggression against objects, physical aggression against people, and may also include aggression towards oneself." [HPO:curators]
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 HP:0000737 Irritability 
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 HP:0000750 Impaired language development 
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 HP:0000952 Jaundice "Yellow pigmentation of the skin or sclera due to bilirubin, which in turn is the result of increased bilirubin concentration in the bloodstream." [HPO:curators]
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 HP:0000961 Cyanosis 
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001254 Lethargy 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001266 Choreoathetosis 
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 HP:0001269 Hemiparesis "Relatively mild weakness in the arm, leg, and in some cases the face on one side of the body." [HPO:curators]
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 HP:0001289 Confusion "Lack of clarity and coherence of thought, perception, understanding, or action." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001304 Torsion dystonia 
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 HP:0001328 Learning disability 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001744 Splenomegaly "An abnormal enlargement of the spleen." [HPO:curators]
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 HP:0001877 Abnormality of erythrocytes "An abnormality of erythrocytes (red-blood cells)." [HPO:curators]
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 HP:0001878 Hemolytic anemia 
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 HP:0002061 Lower limb spasticity 
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 HP:0002121 Absence seizures "Recurrent absence seizures are `generalized seizures` (HP:0002197) that are characterized by a sudden cessation of motor activity and by a blank facial expression with flickering of the eyelids. There is no convulsive muscular activity or loss of postural control." [HPO:probinson]
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 HP:0002133 Status epilepticus 
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 HP:0002186 Apraxia "A defect in the understanding of complex motor commands and in the execution of certain learned movements, i.e., deficits in the cognitive components of learned movements." [HPO:curators]
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002315 Headache "Cephalgia, or pain in the head originating from the cerebral vault." [HPO:curators]
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002360 Sleep disturbances "An abnormality of sleep including such phenomena as 1) insomnia/hypersomnia, 2) non-restorative sleep, 3) sleep schedule disorder, 4) excessive daytime somnolence, 5) sleep apnea, and 6) restlessness." [HPO:curators]
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 HP:0002540 Inability to walk 
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 HP:0002871 Central apnea "Apnea resulting from depression of the respiratory centers in the medulla oblongata. There is a lack of respiratory effort rather than obstruction of airflow." [HPO:curators]
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 HP:0003401 Paresthesia "Abnormal sensations such as tingling, pricking, or numbness of the skin with no apparent physical cause." [HPO:curators]
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 HP:0003470 Paralysis "Paralysis of voluntary muscles means loss of contraction due to interruption of one or more motor pathways from the brain to the muscle fibers. Although the word paralysis is often used interchangeably to mean either complete or partial loss of muscle strength, it is preferable to use paralysis or plegia for complete or severe loss of muscle strength, and paresis for partial or slight loss. Motor paralysis results from deficits of the upper motor neurons (corticospinal, corticobulbar, or subcorticospinal). Motor paralysis is often accompanied by an impairment in the facility of movement." [HPO:curators]
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 HP:0003552 Muscle stiffness 
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 HP:0003593 Early onset 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0006801 Hyperactive deep tendon reflexes 
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 HP:0007034 Generalized hyperreflexia 
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 HP:0007166 Involuntary dystonic or choreiform movements 
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 HP:0007308 Extrapyramidal dyskinesia 
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 HP:0007704 Abnormal eye movements, paroxysmal 
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 HP:0011972 Hypoglycorrhachia "Abnormally low glucose concentration content in the cerebrospinal fluid." [HPO:probinson]
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 HP:0012448 Delayed myelination "`Delayed` (PATO:0000502) `myelination` (GO:0042552)." [ORCID:0000-0001-5208-3432]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000117394 P11166 / SLC2A1 / solute carrier family 2 member 1  / complex






 

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