ENSG00000118197


Homo sapiens

Features
Gene ID: ENSG00000118197
  
Biological name :DDX59
  
Synonyms : DDX59 / DEAD-box helicase 59 / Q5T1V6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q32.1
Gene start: 200623896
Gene end: 200669969
  
Corresponding Affymetrix probe sets: 223662_x_at (Human Genome U133 Plus 2.0 Array)   228385_at (Human Genome U133 Plus 2.0 Array)   228386_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000408662
Ensembl peptide - ENSP00000398152
Ensembl peptide - ENSP00000409954
Ensembl peptide - ENSP00000416331
Ensembl peptide - ENSP00000330460
Ensembl peptide - ENSP00000391312
Ensembl peptide - ENSP00000394304
Ensembl peptide - ENSP00000394367
NCBI entrez gene - 83479     See in Manteia.
OMIM - 615464
RefSeq - XM_017002432
RefSeq - NM_001031725
RefSeq - NM_001320181
RefSeq - NM_001320182
RefSeq - NM_001349799
RefSeq - NM_001349800
RefSeq - XM_005245519
RefSeq - XM_005245521
RefSeq - XM_006711562
RefSeq - XM_011510035
RefSeq - XM_017002431
RefSeq Peptide - NP_001307111
RefSeq Peptide - NP_001336728
RefSeq Peptide - NP_001336729
RefSeq Peptide - NP_001026895
RefSeq Peptide - NP_001307110
swissprot - B7ZBU3
swissprot - Q5T1V5
swissprot - Q5T1V6
swissprot - Q5T1W1
swissprot - B7ZBU4
swissprot - H0Y6Y1
swissprot - H0Y7Z8
Ensembl - ENSG00000118197
  
Related genetic diseases (OMIM): 174300 - Orofaciodigital syndrome V, 174300
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx59ENSDARG00000022177Danio rerio
 DDX59ENSGALG00000002164Gallus gallus
 Ddx59ENSMUSG00000026404Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DDX3X / O00571 / DEAD-box helicase 3, X-linkedENSG0000021530127
DDX3Y / O15523 / DEAD-box helicase 3, Y-linkedENSG0000006704827
DDX4 / Q9NQI0 / DEAD-box helicase 4ENSG0000015267027
DDX41 / Q9UJV9 / DEAD-box helicase 41ENSG0000018325826
DDX1 / Q92499 / DEAD-box helicase 1ENSG0000007978517


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR007529  Zinc finger, HIT-type
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005622 intracellular IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0000161 Median cleft lip "A type of `cleft lip` (HP:0000204) presenting as a midline (median) gap in the upper lip." [HPO:curators]
Show

 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
Show

 HP:0000180 Lobulated tongue 
Show

 HP:0000193 Bifid uvula "A split or cleft uvula." [HPO:curators]
Show

 HP:0000316 Hypertelorism 
Show

 HP:0001162 Postaxial polydactyly (hands) "Supernumerary digits located at the ulnar side of the hand." [HPO:curators]
Show

 HP:0001249 Mental retardation 
Show

 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
Show

 HP:0001830 Postaxial polydactyly (feet) "Polydactyly of the foot most commonly refers to the presence of six toes on one foot. Postaxial polydactyly affects the lateral ray and the duplication may range from a well-formed articulated digit to a rudimentary digit." [HPO:curators]
Show

 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
Show

 HP:0002251 Congenital megacolon "An abnormality resulting from a lack of intestinal ganglion cells (i.e., an aganglionic section of bowel) that results in bowel obstruction with enlargement of the colon." [HPO:curators]
Show

 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr