ENSG00000125810


Homo sapiens

Features
Gene ID: ENSG00000125810
  
Biological name :CD93
  
Synonyms : CD93 / CD93 molecule / Q9NPY3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 20
Strand: -1
Band: p11.21
Gene start: 23079349
Gene end: 23086340
  
Corresponding Affymetrix probe sets: 202877_s_at (Human Genome U133 Plus 2.0 Array)   202878_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000246006
NCBI entrez gene - 22918     See in Manteia.
OMIM - 120577
RefSeq - NM_012072
RefSeq Peptide - NP_036204
swissprot - Q9NPY3
Ensembl - ENSG00000125810
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CD93ENSGALG00000008359Gallus gallus
 Cd93ENSMUSG00000027435Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
THBD / P07204 / thrombomodulinENSG0000017872626
CD248 / Q9HCU0 / CD248 moleculeENSG0000017480723
Q8IWY4 / SCUBE1 / signal peptide, CUB domain and EGF like domain containing 1ENSG0000015930721
Q8IX30 / SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3ENSG0000014619720
Q9NQ36 / SCUBE2 / signal peptide, CUB domain and EGF like domain containing 2ENSG0000017535619
MATN2 / O00339 / matrilin 2ENSG0000013256117
Q86T13 / CLEC14A / C-type lectin domain containing 14AENSG0000017643515
MATN4 / O95460 / matrilin 4ENSG0000012415912
MATN3 / O15232 / matrilin 3ENSG0000013203110
MATN1 / P21941 / matrilin 1, cartilage matrix proteinENSG000001625109
VWA1 / Q6PCB0 / von Willebrand factor A domain containing 1ENSG000001794037


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001304  C-type lectin-like
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006909 phagocytosis NAS
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0016032 viral process IEA
 biological_processGO:0042116 macrophage activation NAS
 biological_processGO:0043312 neutrophil degranulation TAS
 biological_processGO:0098609 cell-cell adhesion IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0009986 cell surface IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030667 secretory granule membrane TAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0035579 specific granule membrane TAS
 cellular_componentGO:0070821 tertiary granule membrane TAS
 cellular_componentGO:0101003 ficolin-1-rich granule membrane TAS
 molecular_functionGO:0001849 complement component C1q binding IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
Neutrophil degranulation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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