ENSG00000162510


Homo sapiens

Features
Gene ID: ENSG00000162510
  
Biological name :MATN1
  
Synonyms : MATN1 / matrilin 1, cartilage matrix protein / P21941
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: p35.2
Gene start: 30711277
Gene end: 30723587
  
Corresponding Affymetrix probe sets: 206904_at (Human Genome U133 Plus 2.0 Array)   206905_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000362870
NCBI entrez gene - 4146     See in Manteia.
OMIM - 115437
RefSeq - NM_002379
RefSeq Peptide - NP_002370
swissprot - P21941
Ensembl - ENSG00000162510
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn1ENSDARG00000030215Danio rerio
 MATN1ENSGALG00000043185Gallus gallus
 Matn1ENSMUSG00000040533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MATN4 / O95460 / matrilin 4ENSG0000012415951
MATN2 / O00339 / matrilin 2ENSG0000013256149
MATN3 / O15232 / matrilin 3ENSG0000013203129
VWA1 / Q6PCB0 / von Willebrand factor A domain containing 1ENSG0000017940318
Q9NQ36 / SCUBE2 / signal peptide, CUB domain and EGF like domain containing 2ENSG0000017535613
Q8IWY4 / SCUBE1 / signal peptide, CUB domain and EGF like domain containing 1ENSG0000015930712
Q8IX30 / SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3ENSG0000014619712
CD93 / Q9NPY3 / CD93 moleculeENSG0000012581011
CD248 / Q9HCU0 / CD248 moleculeENSG0000017480711
THBD / P07204 / thrombomodulinENSG0000017872610
Q86T13 / CLEC14A / C-type lectin domain containing 14AENSG000001764356


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030751  Matrilin-1
 IPR036337  Matrilin, coiled-coil domain superfamily
 IPR036465  von Willebrand factor A-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0003429 growth plate cartilage chondrocyte morphogenesis IEA
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030500 regulation of bone mineralization IEA
 biological_processGO:0065003 protein-containing complex assembly TAS
 cellular_componentGO:0005576 extracellular region TAS
 molecular_functionGO:0005201 extracellular matrix structural constituent TAS
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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