ENSGALG00000043185


Gallus gallus

Features
Gene ID: ENSGALG00000043185
  
Biological name :MATN1
  
Synonyms : MATN1 / matrilin 1, cartilage matrix protein
  
Possible biological names infered from orthology : Cartilage matrix protein / P21941 / P51942
  
Species: Gallus gallus
  
Chr. number: 23
Strand: -1
Band:
Gene start: 245720
Gene end: 262706
  
Corresponding Affymetrix probe sets: Gga.4141.1.S1_at (Chicken Array)   GgaAffx.21063.1.S1_at (Chicken Array)   GgaAffx.26313.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057052
NCBI entrez gene - 396505     See in Manteia.
RefSeq - NM_001030375
RefSeq Peptide - NP_001025546
swissprot - A0A1D5PVS6
Ensembl - ENSGALG00000043185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn1ENSDARG00000030215Danio rerio
 MATN1ENSG00000162510Homo sapiens
 Matn1ENSMUSG00000040533Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MATN4* / Q8VCP9* / O95460* / Q86T13* / CLEC14A* / matrilin 4* / C-type lectin domain containing 14A* / C-type lectin domain family 14 member A *ENSGALG0000000402852
MATN2 / matrilin 2 / O00339* / O08746* / Mus musculus matrilin 2 (Matn2), transcript variant 1, mRNA.*ENSGALG0000004467547
MATN3 / O42401 / Matrilin-3 / O15232* / O35701*ENSGALG0000001647832
VWA1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5*ENSGALG0000000152716
SCUBE1 / signal peptide, CUB domain and EGF like domain containing 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain, EGF-like 1*ENSGALG0000001417812
SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3 / Q66PY1* / Q8IX30* / Signal peptide, CUB and EGF-like domain-containing protein 3 *ENSGALG0000000267512
SCUBE2 / signal peptide, CUB domain and EGF like domain containing 2 / Q9JJS0* / Q9NQ36* / Signal peptide, CUB and EGF-like domain-containing protein 2 *ENSGALG0000003216111
THBD / thrombomodulin / P07204* / P15306*ENSGALG000000444429
CD93 / CD93 molecule / O89103* / Q9NPY3* / Complement component C1q receptor *ENSGALG000000083597


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030751  Matrilin-1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002062 chondrocyte differentiation IEA
 biological_processGO:0003429 growth plate cartilage chondrocyte morphogenesis IEA
 biological_processGO:0030500 regulation of bone mineralization IEA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSGALG00000003283 COMP / cartilage oligomeric matrix protein / P49747* / Q9R0G6*  / complex / reaction






 

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