ENSGALG00000004028


Gallus gallus

Features
Gene ID: ENSGALG00000004028
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : CLEC14A / C-type lectin domain containing 14A / C-type lectin domain family 14 member A / MATN4 / matrilin 4 / O95460 / Q86T13 / Q8VCP9
  
Species: Gallus gallus
  
Chr. number: 20
Strand: 1
Band:
Gene start: 5308806
Gene end: 5314214
  
Corresponding Affymetrix probe sets: GgaAffx.2498.1.S1_s_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000006403
Ensembl peptide - ENSGALP00000054114
NCBI entrez gene - 428140     See in Manteia.
RefSeq - XM_425698
swissprot - A0A1D5PMN1
swissprot - E1BQ45
Ensembl - ENSGALG00000004028
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn4ENSDARG00000015947Danio rerio
 MATN4ENSG00000124159Homo sapiens
 Q86T13ENSG00000176435Homo sapiens
 Matn4ENSMUSG00000016995Mus musculus
 Q8VCP9ENSMUSG00000045930Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MATN2 / matrilin 2 / O00339* / O08746* / Mus musculus matrilin 2 (Matn2), transcript variant 1, mRNA.*ENSGALG0000004467549
MATN1 / matrilin 1, cartilage matrix protein / P21941* / P51942* / Cartilage matrix protein *ENSGALG0000004318542
MATN3 / O42401 / Matrilin-3 / O15232* / O35701*ENSGALG0000001647830
SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3 / Q66PY1* / Q8IX30* / Signal peptide, CUB and EGF-like domain-containing protein 3 *ENSGALG0000000267517
SCUBE1 / signal peptide, CUB domain and EGF like domain containing 1 / Q6NZL8* / Q8IWY4* / signal peptide, CUB domain, EGF-like 1*ENSGALG0000001417817
SCUBE2 / signal peptide, CUB domain and EGF like domain containing 2 / Q9JJS0* / Q9NQ36* / Signal peptide, CUB and EGF-like domain-containing protein 2 *ENSGALG0000003216116
CD93 / CD93 molecule / O89103* / Q9NPY3* / Complement component C1q receptor *ENSGALG0000000835914
VWA1 / von Willebrand factor A domain containing 1 / Q6PCB0* / Q8R2Z5*ENSGALG0000000152713
THBD / thrombomodulin / P07204* / P15306*ENSGALG0000004444213


Protein motifs (from Interpro)
Interpro ID Name
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR002035  von Willebrand factor, type A
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR019466  Matrilin, coiled-coil trimerisation domain
 IPR030765  Matrilin 3


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0005509 calcium ion binding IEA


Pathways (from Reactome)
Pathway description
ECM proteoglycans


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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