ENSMUSG00000045930


Mus musculus

Features
Gene ID: ENSMUSG00000045930
  
Biological name :Clec14a
  
Synonyms : Clec14a / C-type lectin domain family 14 member A / Q8VCP9
  
Possible biological names infered from orthology : C-type lectin domain containing 14A / Q86T13
  
Species: Mus musculus
  
Chr. number: 12
Strand: -1
Band: C1
Gene start: 58264720
Gene end: 58269290
  
Corresponding Affymetrix probe sets: 10400510 (MoGene1.0st)   1419467_at (Mouse Genome 430 2.0 Array)   1419468_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000054451
NCBI entrez gene - 66864     See in Manteia.
MGI - MGI:1914114
RefSeq - NM_025809
RefSeq Peptide - NP_080085
swissprot - Q8VCP9
Ensembl - ENSMUSG00000045930
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 matn4ENSDARG00000015947Danio rerio
 ENSGALG00000004028Gallus gallus
 Q86T13ENSG00000176435Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cd93 / O89103 / Complement component C1q receptor / Q9NPY3* / CD93 molecule*ENSMUSG0000002743519
Cd248 / Q91V98 / Endosialin / Q9HCU0* / CD248 molecule*ENSMUSG0000005648118
Thbd / P15306 / thrombomodulin / P07204*ENSMUSG0000007474318
Q6NZL8 / Scube1 / signal peptide, CUB domain, EGF-like 1 / Q8IWY4* / signal peptide, CUB domain and EGF like domain containing 1*ENSMUSG0000001676315
Q66PY1 / Scube3 / Signal peptide, CUB and EGF-like domain-containing protein 3 / Q8IX30* / signal peptide, CUB domain and EGF like domain containing 3*ENSMUSG0000003867715
Q9JJS0 / Scube2 / Signal peptide, CUB and EGF-like domain-containing protein 2 / Q9NQ36* / signal peptide, CUB domain and EGF like domain containing 2*ENSMUSG0000000727914
Matn4 / matrilin 4 / O95460*ENSMUSG0000001699510
Matn2 / O08746 / Mus musculus matrilin 2 (Matn2), transcript variant 1, mRNA. / O00339* / matrilin 2*ENSMUSG000000223249
Matn3 / O35701 / Matrilin-3 / O15232*ENSMUSG000000205837
Matn1 / P51942 / Cartilage matrix protein / P21941* / matrilin 1, cartilage matrix protein*ENSMUSG000000405335
Vwa1 / Q8R2Z5 / von Willebrand factor A domain containing 1 / Q6PCB0*ENSMUSG000000421164


Protein motifs (from Interpro)
Interpro ID Name
 IPR001304  C-type lectin-like
 IPR016186  C-type lectin-like/link domain superfamily
 IPR016187  C-type lectin fold


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0009897 external side of plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix ISO
 molecular_functionGO:0030246 carbohydrate binding IEA
 molecular_functionGO:1990430 extracellular matrix protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Ace2tm1Lex/Y
Genetic Background: B6;129S5-Ace2tm1Lex/Mmucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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