ENSG00000135097


Homo sapiens

Features
Gene ID: ENSG00000135097
  
Biological name :MSI1
  
Synonyms : MSI1 / musashi RNA binding protein 1 / O43347
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q24.31
Gene start: 120341330
Gene end: 120369180
  
Corresponding Affymetrix probe sets: 206333_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000257552
Ensembl peptide - ENSP00000446710
NCBI entrez gene - 4440     See in Manteia.
OMIM - 603328
RefSeq - XM_011538366
RefSeq - NM_002442
RefSeq - XM_011538363
RefSeq - XM_011538364
RefSeq - XM_011538365
RefSeq - XM_006719403
RefSeq - XM_011538361
RefSeq - XM_011538362
RefSeq Peptide - NP_002433
swissprot - O43347
swissprot - H0YHB7
Ensembl - ENSG00000135097
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msi1ENSDARG00000010710Danio rerio
 MSI1ENSGALG00000007227Gallus gallus
 Msi1ENSMUSG00000054256Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MSI2 / Q96DH6 / musashi RNA binding protein 2ENSG0000015394469
DAZAP1 / Q96EP5 / DAZ associated protein 1ENSG0000007162633
O14979 / HNRNPDL / heterogeneous nuclear ribonucleoprotein D likeENSG0000015279532
HNRNPD / Q14103 / heterogeneous nuclear ribonucleoprotein DENSG0000013866830
Q99729 / HNRNPAB / heterogeneous nuclear ribonucleoprotein A/BENSG0000019745130
Q13148 / TARDBP / TAR DNA binding proteinENSG0000012094825


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034126  RNA-binding protein Musashi homologue, RNA recognition motif 2
 IPR034130  RNA-binding protein Musashi homologue, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding IEA
 molecular_functionGO:0042802 identical protein binding IEA


Pathways (from Reactome)
Pathway description
Regulation of expression of SLITs and ROBOs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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