ENSG00000153944


Homo sapiens

Features
Gene ID: ENSG00000153944
  
Biological name :MSI2
  
Synonyms : MSI2 / musashi RNA binding protein 2 / Q96DH6
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: q22
Gene start: 57255851
Gene end: 57684685
  
Corresponding Affymetrix probe sets: 1552364_s_at (Human Genome U133 Plus 2.0 Array)   225233_at (Human Genome U133 Plus 2.0 Array)   225237_s_at (Human Genome U133 Plus 2.0 Array)   225238_at (Human Genome U133 Plus 2.0 Array)   225240_s_at (Human Genome U133 Plus 2.0 Array)   226134_s_at (Human Genome U133 Plus 2.0 Array)   239232_at (Human Genome U133 Plus 2.0 Array)   243010_at (Human Genome U133 Plus 2.0 Array)   243579_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000462264
Ensembl peptide - ENSP00000414671
Ensembl peptide - ENSP00000462914
Ensembl peptide - ENSP00000463227
Ensembl peptide - ENSP00000284073
Ensembl peptide - ENSP00000313616
Ensembl peptide - ENSP00000392607
NCBI entrez gene - 124540     See in Manteia.
OMIM - 607897
RefSeq - XM_017024149
RefSeq - NM_001322251
RefSeq - NM_138962
RefSeq - NM_170721
RefSeq - XM_005257014
RefSeq - XM_005257015
RefSeq - XM_011524286
RefSeq - XM_011524287
RefSeq - XM_017024147
RefSeq - XM_017024148
RefSeq - NM_001322250
RefSeq Peptide - NP_001309180
RefSeq Peptide - NP_620412
RefSeq Peptide - NP_733839
RefSeq Peptide - NP_001309179
swissprot - B4DM51
swissprot - Q96DH6
swissprot - J3KTC1
swissprot - J3QKT5
swissprot - B4DHE8
Ensembl - ENSG00000153944
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msi2aENSDARG00000033901Danio rerio
 msi2bENSDARG00000032614Danio rerio
 MSI2ENSGALG00000005567Gallus gallus
 Msi2ENSMUSG00000069769Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MSI1 / O43347 / musashi RNA binding protein 1ENSG0000013509776
O14979 / HNRNPDL / heterogeneous nuclear ribonucleoprotein D likeENSG0000015279537
DAZAP1 / Q96EP5 / DAZ associated protein 1ENSG0000007162637
HNRNPD / Q14103 / heterogeneous nuclear ribonucleoprotein DENSG0000013866836
Q99729 / HNRNPAB / heterogeneous nuclear ribonucleoprotein A/BENSG0000019745135
Q13148 / TARDBP / TAR DNA binding proteinENSG0000012094825


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR034126  RNA-binding protein Musashi homologue, RNA recognition motif 2
 IPR034130  RNA-binding protein Musashi homologue, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048864 stem cell development IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003727 single-stranded RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008266 poly(U) RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr