ENSGALG00000005567


Gallus gallus

Features
Gene ID: ENSGALG00000005567
  
Biological name :MSI2
  
Synonyms : MSI2 / musashi RNA binding protein 2
  
Possible biological names infered from orthology : Q920Q6 / Q96DH6 / RNA-binding 2
  
Species: Gallus gallus
  
Chr. number: 19
Strand: -1
Band:
Gene start: 8799084
Gene end: 8981433
  
Corresponding Affymetrix probe sets: GgaAffx.26532.1.S1_at (Chicken Array)   GgaAffx.3491.1.S1_at (Chicken Array)   GgaAffx.3493.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000008916
Ensembl peptide - ENSGALP00000051052
NCBI entrez gene - 417667     See in Manteia.
RefSeq - XM_015296186
RefSeq - XM_015296183
RefSeq - XM_015296185
RefSeq - XM_015296166
RefSeq - XM_015296167
RefSeq - XM_015296168
RefSeq - XM_015296169
RefSeq - XM_015296170
RefSeq - XM_015296171
RefSeq - XM_015296172
RefSeq - XM_015296173
RefSeq - XM_015296175
RefSeq - XM_015296176
RefSeq - XM_015296177
RefSeq - XM_015296178
RefSeq - XM_015296179
RefSeq - XM_015296180
RefSeq - XM_015296181
RefSeq - XM_015296182
swissprot - E1C1R8
swissprot - A0A1D5PE53
Ensembl - ENSGALG00000005567
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 msi2aENSDARG00000033901Danio rerio
 msi2bENSDARG00000032614Danio rerio
 MSI2ENSG00000153944Homo sapiens
 Msi2ENSMUSG00000069769Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MSI1 / musashi RNA binding protein 1 / O43347* / Q61474* / RNA-binding 1 *ENSGALG0000000722770
Q5ZI72 / HNRNPDL / Heterogeneous nuclear ribonucleoprotein D-like / O14979*ENSGALG0000002319933
DAZAP1 / DAZ associated protein 1 / Q96EP5* / Q9JII5*ENSGALG0000001520033
HNRNPD / heterogeneous nuclear ribonucleoprotein D0 / Q14103* / Q60668* / Heteroous nuclear ribonucleoprotein D0 * / heterogeneous nuclear ribonucleoprotein D*ENSGALG0000001118432
HNRNPAB / heterogeneous nuclear ribonucleoprotein A/B / Q99020* / Q99729* / Heteroous nuclear ribonucleoprotein A/B *ENSGALG0000001438128
TARDBP / TAR DNA-binding protein 43 / Q13148* / Q921F2* / TAR DNA binding protein*ENSGALG0000000290625


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0048864 stem cell development IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003727 single-stranded RNA binding IEA
 molecular_functionGO:0008266 poly(U) RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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