ENSG00000197451


Homo sapiens

Features
Gene ID: ENSG00000197451
  
Biological name :HNRNPAB
  
Synonyms : heterogeneous nuclear ribonucleoprotein A/B / HNRNPAB / Q99729
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: 1
Band: q35.3
Gene start: 178204507
Gene end: 178211163
  
Corresponding Affymetrix probe sets: 201277_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000422501
Ensembl peptide - ENSP00000427465
Ensembl peptide - ENSP00000427110
Ensembl peptide - ENSP00000425031
Ensembl peptide - ENSP00000423495
Ensembl peptide - ENSP00000348093
Ensembl peptide - ENSP00000351108
NCBI entrez gene - 3182     See in Manteia.
OMIM - 602688
RefSeq - NM_031266
RefSeq - NM_004499
RefSeq Peptide - NP_004490
RefSeq Peptide - NP_112556
swissprot - Q99729
swissprot - D6RBZ0
swissprot - D6R9P3
swissprot - D6RD18
Ensembl - ENSG00000197451
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hnrnpabaENSDARG00000007960Danio rerio
 hnrnpabbENSDARG00000099865Danio rerio
 HNRNPABENSGALG00000014381Gallus gallus
 Q99020ENSMUSG00000020358Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
HNRNPD / Q14103 / heterogeneous nuclear ribonucleoprotein DENSG0000013866866
O14979 / HNRNPDL / heterogeneous nuclear ribonucleoprotein D likeENSG0000015279557
MSI2 / Q96DH6 / musashi RNA binding protein 2ENSG0000015394435
MSI1 / O43347 / musashi RNA binding protein 1ENSG0000013509733
DAZAP1 / Q96EP5 / DAZ associated protein 1ENSG0000007162629
Q13148 / TARDBP / TAR DNA binding proteinENSG0000012094827


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012956  CARG-binding factor, N-terminal
 IPR034846  hnRNPAB, RNA recognition motif 1
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001837 epithelial to mesenchymal transition ISS
 biological_processGO:0045893 positive regulation of transcription, DNA-templated ISS
 cellular_componentGO:0005634 nucleus ISS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0090575 RNA polymerase II transcription factor complex ISS
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity ISS
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003729 mRNA binding TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0043565 sequence-specific DNA binding ISS


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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