ENSDARG00000007960


Danio rerio

Features
Gene ID: ENSDARG00000007960
  
Biological name :hnrnpaba
  
Synonyms : heterogeneous nuclear ribonucleoprotein A/Ba / hnrnpaba
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A/B / Heteroous nuclear ribonucleoprotein A/B / HNRNPAB / Q99020 / Q99729
  
Species: Danio rerio
  
Chr. number: 14
Strand: 1
Band:
Gene start: 6962271
Gene end: 6968589
  
Corresponding Affymetrix probe sets: Dr.18836.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000124217
Ensembl peptide - ENSDARP00000124249
Ensembl peptide - ENSDARP00000124556
Ensembl peptide - ENSDARP00000124848
Ensembl peptide - ENSDARP00000125019
NCBI entrez gene - 321466     See in Manteia.
swissprot - F8W256
swissprot - F8W2Z3
swissprot - F8W446
swissprot - F8W5P8
swissprot - Q6NYU8
ZFIN ID - ZDB-GENE-030131-185
Ensembl - ENSDARG00000007960
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPABENSGALG00000014381Gallus gallus
 Q99729ENSG00000197451Homo sapiens
 Q99020ENSMUSG00000020358Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpabb / heterogeneous nuclear ribonucleoprotein A/Bb / Q99729* / HNRNPAB* / heterogeneous nuclear ribonucleoprotein A/B*ENSDARG0000009986576
hnrnpd / heterogeneous nuclear ribonucleoprotein D / Q14103* / Q60668* / Heteroous nuclear ribonucleoprotein D0 *ENSDARG0000005924661
hnrnpdl / heterogeneous nuclear ribonucleoprotein D-like / O14979* / Rbm31y* / predicted, 21379 *ENSDARG0000000342952
msi2b / musashi RNA-binding protein 2b / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003261433
msi2a / musashi RNA-binding protein 2a / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003390132
dazap1 / DAZ associated protein 1 / Q96EP5* / Q9JII5*ENSDARG0000007084627
msi1 / musashi RNA-binding protein 1 / O43347* / Q61474* / RNA-binding 1 *ENSDARG0000001071026
tardbp / TAR DNA binding protein / Q13148* / Q921F2*ENSDARG0000004003125
tardbpl / TAR DNA binding protein, like / TARDBP* / Q13148* / Q921F2* / TAR DNA binding protein*ENSDARG0000000445219
zgc:110796ENSDARG0000004129913
CABZ01037298.1ENSDARG0000010201512


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012956  CARG-binding factor, N-terminal
 IPR034846  hnRNPAB, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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