ENSDARG00000041299


Danio rerio

Features
Gene ID: ENSDARG00000041299
  
Biological name :zgc:110796
  
Synonyms : zgc:110796
  
Possible biological names infered from orthology :
  
Species: Danio rerio
  
Chr. number: 5
Strand: 1
Band:
Gene start: 6617401
Gene end: 6620005
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000060531
NCBI entrez gene - 503755     See in Manteia.
RefSeq - NM_001013333
RefSeq Peptide - NP_001013351
swissprot - Q5CZN9
ZFIN ID - ZDB-GENE-050306-36
Ensembl - ENSDARG00000041299
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
msi2b / musashi RNA-binding protein 2b / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003261468
msi2a / musashi RNA-binding protein 2a / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003390167
msi1 / musashi RNA-binding protein 1 / O43347* / Q61474* / RNA-binding 1 *ENSDARG0000001071054
hnrnpaba / heterogeneous nuclear ribonucleoprotein A/Ba / Q99729* / Q99020* / HNRNPAB* / Heteroous nuclear ribonucleoprotein A/B * / heterogeneous nuclear ribonucleoprotein A/B*ENSDARG0000000796048
hnrnpd / heterogeneous nuclear ribonucleoprotein D / Q14103* / Q60668* / Heteroous nuclear ribonucleoprotein D0 *ENSDARG0000005924646
hnrnpdl / heterogeneous nuclear ribonucleoprotein D-like / O14979* / Rbm31y* / predicted, 21379 *ENSDARG0000000342945
hnrnpabb / heterogeneous nuclear ribonucleoprotein A/Bb / Q99729* / HNRNPAB* / heterogeneous nuclear ribonucleoprotein A/B*ENSDARG0000009986544
dazap1 / DAZ associated protein 1 / Q96EP5* / Q9JII5*ENSDARG0000007084637
tardbp / TAR DNA binding protein / Q13148* / Q921F2*ENSDARG0000004003135
tardbpl / TAR DNA binding protein, like / TARDBP* / Q13148* / Q921F2* / TAR DNA binding protein*ENSDARG0000000445235
CABZ01037298.1ENSDARG000001020154


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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