ENSDARG00000099865


Danio rerio

Features
Gene ID: ENSDARG00000099865
  
Biological name :hnrnpabb
  
Synonyms : heterogeneous nuclear ribonucleoprotein A/Bb / hnrnpabb
  
Possible biological names infered from orthology : heterogeneous nuclear ribonucleoprotein A/B / Heteroous nuclear ribonucleoprotein A/B / HNRNPAB / Q99020 / Q99729
  
Species: Danio rerio
  
Chr. number: 21
Strand: 1
Band:
Gene start: 3166519
Gene end: 3175724
  
Corresponding Affymetrix probe sets: Dr.25798.1.A1_at (Zebrafish Array)   NM_213302_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000137921
Ensembl peptide - ENSDARP00000133355
NCBI entrez gene - 406594     See in Manteia.
RefSeq - NM_213302
RefSeq Peptide - NP_998467
swissprot - A0A0R4IIZ7
swissprot - Q6NYA1
ZFIN ID - ZDB-GENE-040426-2516
Ensembl - ENSDARG00000099865
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HNRNPABENSGALG00000014381Gallus gallus
 Q99729ENSG00000197451Homo sapiens
 Q99020ENSMUSG00000020358Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
hnrnpaba / heterogeneous nuclear ribonucleoprotein A/Ba / Q99729* / Q99020* / HNRNPAB* / Heteroous nuclear ribonucleoprotein A/B * / heterogeneous nuclear ribonucleoprotein A/B*ENSDARG0000000796083
hnrnpd / heterogeneous nuclear ribonucleoprotein D / Q14103* / Q60668* / Heteroous nuclear ribonucleoprotein D0 *ENSDARG0000005924666
hnrnpdl / heterogeneous nuclear ribonucleoprotein D-like / O14979* / Rbm31y* / predicted, 21379 *ENSDARG0000000342959
msi2b / musashi RNA-binding protein 2b / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003261437
msi2a / musashi RNA-binding protein 2a / MSI2* / Q920Q6* / Q96DH6* / RNA-binding 2 * / musashi RNA binding protein 2*ENSDARG0000003390136
dazap1 / DAZ associated protein 1 / Q96EP5* / Q9JII5*ENSDARG0000007084630
msi1 / musashi RNA-binding protein 1 / O43347* / Q61474* / RNA-binding 1 *ENSDARG0000001071029
tardbp / TAR DNA binding protein / Q13148* / Q921F2*ENSDARG0000004003127
tardbpl / TAR DNA binding protein, like / TARDBP* / Q13148* / Q921F2* / TAR DNA binding protein*ENSDARG0000000445221
CABZ01037298.1ENSDARG0000010201514
zgc:110796ENSDARG0000004129913


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012956  CARG-binding factor, N-terminal
 IPR034846  hnRNPAB, RNA recognition motif 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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