ENSG00000135801


Homo sapiens

Features
Gene ID: ENSG00000135801
  
Biological name :TAF5L
  
Synonyms : O75529 / TAF5L / TATA-box binding protein associated factor 5 like
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q42.13
Gene start: 229593111
Gene end: 229626047
  
Corresponding Affymetrix probe sets: 1554415_at (Human Genome U133 Plus 2.0 Array)   213654_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000258281
Ensembl peptide - ENSP00000355634
Ensembl peptide - ENSP00000355635
Ensembl peptide - ENSP00000355636
NCBI entrez gene - 27097     See in Manteia.
RefSeq - XM_011544164
RefSeq - NM_001025247
RefSeq - NM_014409
RefSeq - XM_005273099
RefSeq - XM_005273100
RefSeq - XM_011544162
RefSeq - XM_011544163
RefSeq Peptide - NP_055224
RefSeq Peptide - NP_001020418
swissprot - O75529
swissprot - Q5TDI7
Ensembl - ENSG00000135801
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 taf5lENSDARG00000025808Danio rerio
 TAF5LENSGALG00000011098Gallus gallus
 Taf5lENSMUSG00000038697Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TAF5 / Q15542 / TATA-box binding protein associated factor 5ENSG0000014883540
Q8NAA4 / ATG16L2 / autophagy related 16 like 2ENSG0000016801017
Q676U5 / ATG16L1 / autophagy related 16 like 1ENSG0000008597816
WDR83 / Q9BRX9 / WD repeat domain 83ENSG0000012315410


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR007582  TFIID subunit TAF5, NTD2 domain
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily
 IPR037264  TFIID subunit TAF5, NTD2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006366 transcription by RNA polymerase II TAS
 biological_processGO:0043966 histone H3 acetylation IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016607 nuclear speck IDA
 cellular_componentGO:0030914 STAGA complex IEA
 cellular_componentGO:0033276 transcription factor TFTC complex IEA
 cellular_componentGO:0036464 cytoplasmic ribonucleoprotein granule IDA
 molecular_functionGO:0003700 DNA-binding transcription factor activity TAS
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0004402 histone acetyltransferase activity IDA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
HATs acetylate histones


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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