ENSG00000168010


Homo sapiens

Features
Gene ID: ENSG00000168010
  
Biological name :ATG16L2
  
Synonyms : ATG16L2 / autophagy related 16 like 2 / Q8NAA4
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: 1
Band: q13.4
Gene start: 72814308
Gene end: 72843674
  
Corresponding Affymetrix probe sets: 225883_at (Human Genome U133 Plus 2.0 Array)   229389_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000443569
Ensembl peptide - ENSP00000326340
Ensembl peptide - ENSP00000400705
Ensembl peptide - ENSP00000437412
Ensembl peptide - ENSP00000437932
Ensembl peptide - ENSP00000438474
Ensembl peptide - ENSP00000441132
Ensembl peptide - ENSP00000441189
Ensembl peptide - ENSP00000441747
Ensembl peptide - ENSP00000441989
Ensembl peptide - ENSP00000442635
Ensembl peptide - ENSP00000442931
NCBI entrez gene - 89849     See in Manteia.
RefSeq - XM_011545334
RefSeq - NM_001318766
RefSeq - NM_033388
RefSeq - XM_005274376
RefSeq - XM_006718732
RefSeq - XM_006718733
RefSeq - XM_006718734
RefSeq - XM_011545332
RefSeq - XM_011545333
RefSeq Peptide - NP_001305695
RefSeq Peptide - NP_203746
swissprot - Q8NAA4
swissprot - F5GWM4
swissprot - F5GWZ9
swissprot - F5H7B6
swissprot - H0YF72
swissprot - H0YFC3
swissprot - H0YFG0
swissprot - H0YFZ7
swissprot - H0YG45
swissprot - H0YGE3
swissprot - H0YG67
swissprot - H0YGJ8
Ensembl - ENSG00000168010
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 atg16l2ENSDARG00000043238Danio rerio
 atg16l2ENSDARG00000109384Danio rerio
 Q6KAU8ENSMUSG00000047767Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q676U5 / ATG16L1 / autophagy related 16 like 1ENSG0000008597838
TAF5L / O75529 / TATA-box binding protein associated factor 5 likeENSG0000013580117
TAF5 / Q15542 / TATA-box binding protein associated factor 5ENSG0000014883517
WDR83 / Q9BRX9 / WD repeat domain 83ENSG0000012315412


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR011042  Six-bladed beta-propeller, TolB-like
 IPR013923  Autophagy-related protein 16
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR019775  WD40 repeat, conserved site
 IPR020472  G-protein beta WD-40 repeat
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000045 autophagosome assembly IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0039689 negative stranded viral RNA replication IEA
 cellular_componentGO:0000421 autophagosome membrane IBA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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