ENSG00000136854


Homo sapiens

Features
Gene ID: ENSG00000136854
  
Biological name :STXBP1
  
Synonyms : P61764 / STXBP1 / syntaxin binding protein 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: 1
Band: q34.11
Gene start: 127579370
Gene end: 127696027
  
Corresponding Affymetrix probe sets: 202260_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000485680
Ensembl peptide - ENSP00000485397
Ensembl peptide - ENSP00000485895
Ensembl peptide - ENSP00000494727
Ensembl peptide - ENSP00000490903
Ensembl peptide - ENSP00000490810
Ensembl peptide - ENSP00000490674
Ensembl peptide - ENSP00000490613
Ensembl peptide - ENSP00000490519
Ensembl peptide - ENSP00000490199
Ensembl peptide - ENSP00000489791
Ensembl peptide - ENSP00000489762
Ensembl peptide - ENSP00000489655
Ensembl peptide - ENSP00000487211
Ensembl peptide - ENSP00000486944
Ensembl peptide - ENSP00000486814
Ensembl peptide - ENSP00000362396
Ensembl peptide - ENSP00000362399
Ensembl peptide - ENSP00000485361
NCBI entrez gene - 6812     See in Manteia.
OMIM - 602926
RefSeq - NM_001032221
RefSeq - NM_003165
RefSeq Peptide - NP_001027392
RefSeq Peptide - NP_003156
swissprot - A0A1B0GVQ5
swissprot - A0A1B0GUQ2
swissprot - A0A1B0GTP9
swissprot - A0A1B0GTD8
swissprot - A0A0D9SG72
swissprot - A0A0D9SFW6
swissprot - A0A0D9SFQ7
swissprot - A0A0D9SEP9
swissprot - A0A0D9SEH5
swissprot - A0A096LP52
swissprot - A0A096LP33
swissprot - Q68CM6
swissprot - P61764
swissprot - A0A1B0GW76
swissprot - A0A1B0GWF2
swissprot - A0A1B0GVV9
Ensembl - ENSG00000136854
  
Related genetic diseases (OMIM): 612164 - Epileptic encephalopathy, early infantile, 4, 612164
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 stxbp1aENSDARG00000001994Danio rerio
 stxbp1bENSDARG00000056036Danio rerio
 STXBP1ENSGALG00000040003Gallus gallus
 O08599ENSMUSG00000026797Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q15833 / STXBP2 / syntaxin binding protein 2ENSG0000007694461
O00186 / STXBP3 / syntaxin binding protein 3ENSG0000011626638


Protein motifs (from Interpro)
Interpro ID Name
 IPR001619  Sec1-like protein
 IPR036045  Sec1-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002576 platelet degranulation IMP
 biological_processGO:0003006 developmental process involved in reproduction IEA
 biological_processGO:0006887 exocytosis IEA
 biological_processGO:0006904 vesicle docking involved in exocytosis IEA
 biological_processGO:0007269 neurotransmitter secretion TAS
 biological_processGO:0007274 neuromuscular synaptic transmission IEA
 biological_processGO:0007412 axon target recognition ISS
 biological_processGO:0010807 regulation of synaptic vesicle priming ISS
 biological_processGO:0014047 glutamate secretion TAS
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016188 synaptic vesicle maturation ISS
 biological_processGO:0016192 vesicle-mediated transport IEA
 biological_processGO:0031333 negative regulation of protein complex assembly IEA
 biological_processGO:0031338 regulation of vesicle fusion IEA
 biological_processGO:0031630 regulation of synaptic vesicle fusion to presynaptic active zone membrane TAS
 biological_processGO:0032229 negative regulation of synaptic transmission, GABAergic ISS
 biological_processGO:0032355 response to estradiol IEA
 biological_processGO:0035542 regulation of SNARE complex assembly TAS
 biological_processGO:0043306 positive regulation of mast cell degranulation IEA
 biological_processGO:0043524 negative regulation of neuron apoptotic process IEA
 biological_processGO:0045921 positive regulation of exocytosis IEA
 biological_processGO:0045956 positive regulation of calcium ion-dependent exocytosis IEA
 biological_processGO:0050821 protein stabilization IEA
 biological_processGO:0060292 long term synaptic depression IEA
 biological_processGO:0070527 platelet aggregation IMP
 biological_processGO:0071346 cellular response to interferon-gamma IEA
 biological_processGO:0072659 protein localization to plasma membrane IDA
 biological_processGO:0099525 presynaptic dense core vesicle exocytosis IEA
 biological_processGO:0106022 positive regulation of vesicle docking IEA
 biological_processGO:1903296 positive regulation of glutamate secretion, neurotransmission IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005739 mitochondrion ISS
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030424 axon IEA
 cellular_componentGO:0031091 platelet alpha granule IDA
 cellular_componentGO:0032991 protein-containing complex ISS
 cellular_componentGO:0043195 terminal bouton IEA
 cellular_componentGO:0043209 myelin sheath IEA
 cellular_componentGO:0045335 phagocytic vesicle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 cellular_componentGO:0048787 presynaptic active zone membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0098793 presynapse IEA
 cellular_componentGO:0098794 postsynapse IEA
 molecular_functionGO:0000149 SNARE binding ISS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017075 syntaxin-1 binding ISS
 molecular_functionGO:0019901 protein kinase binding IEA
 molecular_functionGO:0019904 protein domain specific binding IEA
 molecular_functionGO:0019905 syntaxin binding IPI
 molecular_functionGO:0042802 identical protein binding ISS
 molecular_functionGO:0043274 phospholipase binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IEA


Pathways (from Reactome)
Pathway description
Regulation of insulin secretion
Neurexins and neuroligins


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000343 Long philtrum 
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 HP:0000365 Hearing loss 
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 HP:0000430 Hypoplastic nasal alae "Thinned, deficient, or excessively arched `ala nasi` (FMA:59519)." [pmid:19152422]
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 HP:0000445 Broad nose 
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 HP:0000787 Kidney stones 
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 HP:0000992 Photosensitivity "An increased sensitivity of the skin to light. Photosensitivity may result in a rash upon exposure to the sun (which is known as photodermatosis). Photosensitivity can be diagnosed by phototests in which light is shone on small areas of skin." [HPO:curators]
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 HP:0001151 Impaired horizontal smooth pursuit "An `abnormality of ocular smooth pursuit` (HP:0000617) characterized by an impairment of the ability to track horizontally moving objects." [HPO:probinson]
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 HP:0001163 Abnormality of the metacarpal bones 
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 HP:0001231 Abnormality of the fingernails "An abnormality of the `fingernails` (FMA:54327)." [HPO:probinson]
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 HP:0001249 Mental retardation 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001251 Ataxia "Ataxia is a nonspecific neurological sign and symptom consisting of gross lack of coordination of muscle movements. Ataxia is caused by dysfunction of one or more parts of the nervous system including the cerebellum, the sensory nervous system, the vestibular system, or the cerebral cortex." [HPO:curators]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001336 Myoclonus "Very brief, involuntary random muscular contractions occurring at rest, in response to sensory stimuli, or accompanying voluntary movements." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001344 Absent speech development 
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 HP:0002020 Gastroesophageal reflux 
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 HP:0002059 Cerebral atrophy 
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002119 Ventriculomegaly 
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 HP:0002120 Cerebral cortical atrophy 
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 HP:0002123 Myoclonic seizures "Myoclonic seizures are sudden, brief losses of consciousness and postural tone not associated with tonic muscular contractions. Myoclonic seizures may involve one body part or the entire body. In the latter case, the myoclonic seizure is accompanied by a violent fall but not by loss of consciousness." [HPO:curators]
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 HP:0002133 Status epilepticus 
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 HP:0002213 Fine hair 
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 HP:0002266 Focal clonic seizures 
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 HP:0002353 EEG abnormalities "Abnormality observed by electroencephalogram (EEG), which is used to record of the brain s spontaneous electrical activity from multiple electrodes placed on the scalp." [HPO:curators]
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 HP:0002373 Febrile seizures "Febrile seizures are convulsions induced by a fever in infants or small children and are generally characterized by loss of consciousness and tonic-clonic movements. Most febrile seizures last a minute or two." [HPO:curators]
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 HP:0002376 Developmental regression 
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 HP:0002384 Complex partial seizures "A `partial seizure` (HP:0007359) characterized by impairment or loss of consciousness." [HPO:curators]
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 HP:0002510 Spastic tetraplegia "Spastic paralysis affecting all four limbs." [HPO:curators]
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 HP:0002521 Hypsarrhythmia "Hypsarrhythmia is abnormal interictal high amplitude waves and a background of irregular spikes demonstrated by electroencephalography (EEG)." [HPO:curators]
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 HP:0003623 Onset in neonatal period 
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 HP:0003828 Variable expressivity 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0006808 Hypomyelination of the brain 
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 HP:0007105 Infantile encephalopathy 
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 HP:0007334 Partial seizures with secondary generalization "`Partial seizures` (HP:0007359) with secondary evolution into a `generalized seizures` (HP:0002197)." [HPO:probinson]
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 HP:0007360 Aplasia/Hypoplasia of the cerebellum 
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 HP:0009896 Abnormality of the antitragus "An abnormality of the antitrgus, which is a small tubercle opposite to the tragus of the ear. The antitragus and the tragus are separated by the intertragic notch." [HPO:curators]
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 HP:0010818 Tonic seizures "A type of `seizure` (HP:0001250) characterized by a sudden increase in muscle tone whereby the body, arms, or legs make sudden stiffening movements and consciousness is usually preserved. Tonic seizures can occur during sleep. Tonic seizures usually affect both sides of the body, and cause a fall if the affected person was standing when the seizure started." [HPO:probinson]
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 HP:0010851 EEG: burst suppression "The burst suppression pattern in electroencephalography refers to a characteristic periodic pattern of low voltage (<10 microvolts) suppressed background and a relatively shorter pattern of higher amplitude slow, sharp, and spiking complexes." [HPO:probinson]
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0011097 Epileptic spasms "A sudden flexion, extension or mixed extension-flexion of predominantly proximal and truncal muscles which is usually more sustained than a myoclonic movement but not as sustained as a tonic seizure." [HPO:jalbers]
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 HP:0011121 Abnormality of skin morphology "Any morphological abnormality of the `skin` (FMA:7163)." [HPO:probinson]
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 HP:0011151 Obtundation status "Atypical absence lasting for more than 30 minutes." [HPO:jalbers]
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 HP:0011344 Severe global developmental delay "A severe delay in the achievement of motor or mental milestones in the domains of development of a child." [DDD:hvfirth]
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 HP:0012469 Infantile spasms "Infantile spasms represent a subset of "epileptic spasms". Infantile Spasms are epileptic spasms starting in the first year of life (infancy)." [HPO:ihelbig]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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 HP:0012758 Neurodevelopmental delay 
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 HP:0025356 Pschomotor retardation 
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 HP:0100022 Abnormality of movement "An abnormality of movement with a neurological basis characterized by changes in coordination and speed of voluntary movements." [HPO:probinson]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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 HP:0200134 Epileptic encephalopathy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000106089 STX1A / Q16623 / syntaxin 1A  / complex
 ENSG00000011132 APBA3 / O96018 / amyloid beta precursor protein binding family A member 3  / complex






 

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