ENSG00000144535


Homo sapiens

Features
Gene ID: ENSG00000144535
  
Biological name :DIS3L2
  
Synonyms : DIS3L2 / DIS3 like 3-5 exoribonuclease 2 / Q8IYB7
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: 1
Band: q37.1
Gene start: 231961245
Gene end: 232344350
  
Corresponding Affymetrix probe sets: 227597_at (Human Genome U133 Plus 2.0 Array)   238602_at (Human Genome U133 Plus 2.0 Array)   244304_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000401700
Ensembl peptide - ENSP00000415419
Ensembl peptide - ENSP00000408764
Ensembl peptide - ENSP00000273009
Ensembl peptide - ENSP00000315569
Ensembl peptide - ENSP00000374655
Ensembl peptide - ENSP00000386594
Ensembl peptide - ENSP00000386799
Ensembl peptide - ENSP00000388999
Ensembl peptide - ENSP00000390467
Ensembl peptide - ENSP00000391175
Ensembl peptide - ENSP00000392754
NCBI entrez gene - 129563     See in Manteia.
OMIM - 614184
RefSeq - NM_152383
RefSeq - NM_001257281
RefSeq - NM_001257282
RefSeq Peptide - NP_001244211
RefSeq Peptide - NP_001244210
RefSeq Peptide - NP_689596
swissprot - Q8IYB7
swissprot - H7C036
swissprot - H7C1Q8
swissprot - H7C302
swissprot - H7C440
swissprot - C9JGP4
Ensembl - ENSG00000144535
  
Related genetic diseases (OMIM): 267000 - Perlman syndrome, 267000
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 dis3l2ENSDARG00000033259Danio rerio
 DIS3L2ENSGALG00000007767Gallus gallus
 Dis3l2ENSMUSG00000053333Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
DIS3 / Q9Y2L1 / DIS3 homolog, exosome endoribonuclease and 3-5 exoribonucleaseENSG0000008352028
DIS3L / Q8TF46 / DIS3 like exosome 3-5 exoribonucleaseENSG0000016693827


Protein motifs (from Interpro)
Interpro ID Name
 IPR012340  Nucleic acid-binding, OB-fold
 IPR015056  Nuclear receptor-binding factor 2
 IPR022966  Ribonuclease II/R, conserved site
 IPR028591  DIS3-like exonuclease 2
 IPR033771  Rrp44-like cold shock domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000278 mitotic cell cycle IMP
 biological_processGO:0000291 nuclear-transcribed mRNA catabolic process, exonucleolytic IMP
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0007049 cell cycle IEA
 biological_processGO:0008285 negative regulation of cell proliferation IMP
 biological_processGO:0010587 miRNA catabolic process IEA
 biological_processGO:0019827 stem cell population maintenance IEA
 biological_processGO:0034427 nuclear-transcribed mRNA catabolic process, exonucleolytic, 3"-5" IEA
 biological_processGO:0051301 cell division IEA
 biological_processGO:0051306 mitotic sister chromatid separation IMP
 biological_processGO:0090305 nucleic acid phosphodiester bond hydrolysis IEA
 biological_processGO:0090501 RNA phosphodiester bond hydrolysis IEA
 biological_processGO:0090503 RNA phosphodiester bond hydrolysis, exonucleolytic IEA
 biological_processGO:1990074 polyuridylation-dependent mRNA catabolic process ISS
 cellular_componentGO:0000178 exosome (RNase complex) IBA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005844 polysome TAS
 molecular_functionGO:0000175 3"-5"-exoribonuclease activity IDA
 molecular_functionGO:0000287 magnesium ion binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004527 exonuclease activity IEA
 molecular_functionGO:0004540 ribonuclease activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008266 poly(U) RNA binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000023 Inguinal hernia 
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000098 Increased body height 
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 HP:0000187 Broad alveolar ridges 
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 HP:0000194 Open mouth 
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 HP:0000256 Macrocephaly "The presence of an abnormally large `skull` (FMA:46565)." [HPO:probinson]
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 HP:0000268 Dolichocephaly 
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 HP:0000278 Retrognathia 
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 HP:0000286 Epicanthus "An epicanthal fold is a semilunar fold of skin that extends from the upper eyelid across the medial canthal area to the lower eyelid." [HPO:curators]
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 HP:0000311 Round face "An unusually round appearance of the face." [HPO:curators]
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 HP:0000319 Flat philtrum 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000348 High forehead "An abnormally increased height of the forehead." [HPO:curators]
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 HP:0000358 Posteriorly rotated ears "A type of `abnormal location of the ears` (HP:0000357) in which the position of the ears is characterized by posterior rotation (the superior part of the ears is rotated towards the back of the head, and the inferior part of the ears towards the front)." [HPO:probinson]
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000391 Thickened helices 
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000463 Nares, anteverted "Anteriorly-facing nostrils viewed with the head in the Frankfurt horizontal and the eyes of the observer level with the eyes of the subject." [pmid:19152422]
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 HP:0000490 Deep set eyes 
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000526 Aniridia "Congenital absence of the iris." [HPO:curators]
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0000790 Hematuria "The presence of blood in the urine. Hematuria may be gross hematuria (visible to the naked eye) or microscopic hematuria (detected by dipstick or microscopic examination of the urine)." [HPO:curators]
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 HP:0000822 Hypertension "High blood pressure." [HPO:curators]
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 HP:0000842 Hyperinsulinemia 
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 HP:0000969 Edema "An abnormal accumulation of fluid beneath the skin, or in one or more cavities of the body. Edema may be related to one or more of the following factors: 1) increased capillary hydrostatic pressure, 2) decreased osmotic pressure of plasma, 3) decreased tissue tension and lymphatic drainage, 4) increased osmotic pressure of tissue fluids, and 5) increased capillary permeability." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001274 Agenesis of corpus callosum "Absence of the corpus callosum as a result of the failure of the corpus callosum to develop, which can be the result of a failure in any one of the multiple steps of callosal development including cellular proliferation and migration, axonal growth or glial patterning at the midline." [HPO:curators]
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 HP:0001328 Learning disability 
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 HP:0001507 Growth abnormality 
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 HP:0001520 Large for gestational age "The term large for gestational age applies to babies whose birth weight lies above the 90th percentile for that gestational age." [HPO:curators]
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 HP:0001541 Ascites 
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 HP:0001561 Polyhydramnios 
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 HP:0001626 Abnormality of the cardiovascular system "Any abnormality of the heart or vasculature." [HPO:curators]
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 HP:0001824 Weight loss 
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 HP:0001945 Fever 
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 HP:0001999 Facial dysmorphism 
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 HP:0002027 Abdominal pain 
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 HP:0002133 Status epilepticus 
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 HP:0002240 Hepatomegaly "An abnormal enlargment of the liver." [HPO:curators]
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 HP:0002580 Volvulus 
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 HP:0002667 Nephroblastoma (Wilms tumor) "A kind of renal tumor primarily affecting children. It is characterized by an abnormal proliferation of the metanephric blastema cells, which are believed to be primitive embryologic cells of the kidney. Clinically, nephroblatoma usually presents as an abdominal mass, and in some cases with abdominal pain, hypertension, hematuria, and fever." [HPO:curators]
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 HP:0002705 High, narrow palate "The presence of a high and narrow palate." [HPO:curators]
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 HP:0002716 Lymphadenopathy 
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 HP:0002896 Liver cancer 
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0003271 Visceromegaly 
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 HP:0004510 Islets of Langerhans hyperplasia 
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 HP:0005247 Abdominal muscular hypoplasia 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0005306 Capillary hemangiomas "The presence of a capillary hemangiomas, which are hemangiomas with small endothelial spaces." [HPO:curators]
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 HP:0007598 Bilateral single palmar creases 
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 HP:0008643 Nephroblastomatosis 
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 HP:0008696 Bilateral renal hamartomas 
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 HP:0008736 Hypoplasia of penis 
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 HP:0010733 Naevus flammeus of the eyelid "`Naevus flammeus` (HP:0001052) localised in the skin of the eyelid." [HPO:sdoelken]
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 HP:0010804 Tented upper lip vermilion "Triangular appearance of the oral aperture with the apex in the midpoint of the upper vermilion and the lower vermilion forming the base." [pmid:19125428]
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 HP:0011341 Long upper lip "Increased width of the `upper lip` (FMA:59817)." [DDD:jhurst]
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 HP:0011611 Interrupted aortic arch "Non-continuity of the aortic arch with an atretic point or absent segment." [DDD:dbrown]
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 HP:0012090 Abnormality of pancreas morphology 
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 HP:0100526 Neoplasia of the lungs 
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 HP:0100541 Femoral hernia "A hernia which occurs just below the inguinal ligament, where abdominal contents pass through a naturally occurring weakness called the femoral canal." [HPO:sdoelken]
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 HP:0100880 Nephrogenic rest "Abnormally persistent clusters of embryonal cells, representing microscopic malformations (dysplasias) of the developing kidney." [HPO:sdoelken]
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 HP:0200116 Distal ileal atresia 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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