ENSG00000162782


Homo sapiens

Features
Gene ID: ENSG00000162782
  
Biological name :TDRD5
  
Synonyms : Q8NAT2 / TDRD5 / tudor domain containing 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q25.2
Gene start: 179591613
Gene end: 179691272
  
Corresponding Affymetrix probe sets: 231104_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000406052
Ensembl peptide - ENSP00000410744
Ensembl peptide - ENSP00000294848
Ensembl peptide - ENSP00000356586
NCBI entrez gene - 163589     See in Manteia.
OMIM - 617748
RefSeq - XM_017000473
RefSeq - NM_001199085
RefSeq - NM_001199089
RefSeq - NM_001199091
RefSeq - NM_001199092
RefSeq - NM_001349923
RefSeq - NM_173533
RefSeq - XM_005244934
RefSeq - XM_005244935
RefSeq Peptide - NP_001186014
RefSeq Peptide - NP_001336852
RefSeq Peptide - NP_775804
RefSeq Peptide - NP_001186018
RefSeq Peptide - NP_001186020
RefSeq Peptide - NP_001186021
swissprot - A0A0C4DG74
swissprot - Q8NAT2
swissprot - A0A024R910
Ensembl - ENSG00000162782
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd5ENSDARG00000071450Danio rerio
 TDRD5ENSGALG00000033634Gallus gallus
 Tdrd5ENSMUSG00000060985Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
B5MCY1 / TDRD15 / tudor domain containing 15ENSG0000021881913
TDRKH / Q9Y2W6 / tudor and KH domain containingENSG0000018213413
TDRD6 / O60522 / tudor domain containing 6ENSG0000018011313
RNF17 / Q9BXT8 / ring finger protein 17ENSG0000013297213
TDRD1 / Q9BXT4 / tudor domain containing 1ENSG0000009562712


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR025605  OST-HTH/LOTUS domain
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007281 germ cell development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007286 spermatid development IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030719 P granule organization IEA
 biological_processGO:0043046 DNA methylation involved in gamete generation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0033391 chromatoid body IEA
 cellular_componentGO:0071546 pi-body IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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